Gene Information

Name : Psesu_2403 (Psesu_2403)
Accession : YP_004147467.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2632418 - 2633884 bp
Length : 1467 bp
Strand : -
Note : TIGRFAM: pyruvate kinase; KEGG: xal:XALc_2303 pyruvate kinase protein; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta

DNA sequence : 
ATGACCGACCGCCTGCGCCGTACCAAGATCCTCGCCACCCTCGGCCCGGCGACCGACCCGCCCGGCGTCCTCGAGGCGCT
CTTCCGTGCGGGCGTCAATGTCGTCCGGCTCAACTTCTCCCACGGCGATCCCTCCGGCCAGGCCAAGCGCGCCGCCGAGG
TCCGCGTCGCCGCGCAGAAGGTCGGTGCCGAGGTCGGCATCCTGGCCGACCTGCCGGGCCCGAAGATCCGCATCGAACGC
TTTGCCGAGGGCAAGGTGGTGCTGAAGGCTGGCGACCGCTTCGACCTGGTGGCCGATGCCAATGCCCCGGCTGGCGACAC
CACCCAGGTCGGCGTCAGCTACCTGGGCCTGCCCGGCGACGTTGCCGCCGGCGACGTGCTGCTGCTGGACGACGGCCTGA
TGCAGCTGAAGGTGGAGCAGGTCGATGGCGTGCGCATCGTCTGCACCGTGCTCAACGACGGCGTGCTGTCCGACCGCAAG
GGCCTGAACAAGCAGGGCGGCGGCCTGTCCCTGGGCGCGCTGACCGAGCGCGACAAGGAGCTGATCGGCATCGTCGCCAA
GATCGGCGTGGACTTCATCGCCGTGTCCTTCTGCCGCAACGCCGAAGACATGAACGAGGCCCGCCGCATCGCCCGCGAGC
ACGGCTCCGATGCGGCGCTGGTGTCCAAGATCGAGCGCACCGAGGCGATCGAGAACCTGGCCGAGATCATCGACGCCTCC
GACGTGGTCATGGTCGCCCGCGGCGACCTGGGCGTGGAGATCGGCGATGCCGAGCTGCCGGGCCTGCAGAAGAAGATCAT
CCGCGAGTCGCTGGCCCGCAACCGCGTGGTGATCACCGCCACCCAGATGCTGCAGTCGATGGTCGAGAGCCCGATCCCGA
CCCGCGCCGAGGTGCTGGACGTGGCCAACGCGGTGATCGACGGCACCGACGCGGTGATGCTGTCGGCCGAGACCGCGGCC
GGCGCCTACCCGGTCAAGGCGGTCGAGGCGATGGCGCGCATCTGCGTCGGCGCCGAGCGCCAGTTCCAGAGCCAGGTCGA
CTTCGCCAACGCACAGCGCAACCTGGAGCGCGCGGACCAGGCCATCGCCATGGCCACCATGTTCCTGTCCGAGCACATCG
GCGTGCGCGCGATCGTGGCCATGACCGAGTCCGGCGGCACCCCGCGCTACCTGTCGCGCTTCCGTGCCAAGGCCCCGATC
TACGCCATCACCCGCCACGACGGCGCGCGCCGGCGCATGGCGCTGATGCGCGACGTGTTCCCGATCAACTTCGACAGCCG
TGGCCTGACCCCGCGCGAGGCCGCGCGCGGCAGCATCCGCGTGCTGGTCGACGCCGGCATGCTGGCGGCGGGCGACCGCG
TGGTGTTCACCTCCGGCGAGCACATGGAAACCCACGGCGCGACCAACACCCTGCGCCTGCTGGAGGTCGGTGCCGACGGC
CGCGCCAGCGGCCTGGGCGACCTGTAA

Protein sequence : 
MTDRLRRTKILATLGPATDPPGVLEALFRAGVNVVRLNFSHGDPSGQAKRAAEVRVAAQKVGAEVGILADLPGPKIRIER
FAEGKVVLKAGDRFDLVADANAPAGDTTQVGVSYLGLPGDVAAGDVLLLDDGLMQLKVEQVDGVRIVCTVLNDGVLSDRK
GLNKQGGGLSLGALTERDKELIGIVAKIGVDFIAVSFCRNAEDMNEARRIAREHGSDAALVSKIERTEAIENLAEIIDAS
DVVMVARGDLGVEIGDAELPGLQKKIIRESLARNRVVITATQMLQSMVESPIPTRAEVLDVANAVIDGTDAVMLSAETAA
GAYPVKAVEAMARICVGAERQFQSQVDFANAQRNLERADQAIAMATMFLSEHIGVRAIVAMTESGGTPRYLSRFRAKAPI
YAITRHDGARRRMALMRDVFPINFDSRGLTPREAARGSIRVLVDAGMLAAGDRVVFTSGEHMETHGATNTLRLLEVGADG
RASGLGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-76 49
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-66 42
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-66 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-66 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_2403 YP_004147467.1 pyruvate kinase VFG0479 Protein 1e-66 42