Gene Information

Name : Psesu_2109 (Psesu_2109)
Accession : YP_004147176.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2324441 - 2325943 bp
Length : 1503 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: xal:XALc_2105 aldehyde dehydrogenase protein

DNA sequence :
ATGTCCAACCCACGTACCCGCGCCGACTGGCAGGCCATGGCCGACGGGCTGGAACTGCGCACCCGCGCCTTCATCGATGG
CCAGTACGTGGATGCCGCCGACGGCCGCACCTTCGACTGCACCAGCCCGATCGACGGCCGGGTGCTGGGCCAGGTCGCAC
GCGCCGGCCAGGCCGACGTCGAACGCGCGGTACGCGCGGCGCGGCGCAGCTTCGAGGCCGGGCACTGGTCGCGGGCAAAG
CCGGTCAAGCGCAAGAAGACCCTGCAGAAGCTGGTGCAGCTGATCGAACAGCACGCCGACGAGCTGGCGCTGCTGGAAAC
CCTGGACATGGGCAAGCCGATCGACGACGCCCGCAACGTCGACATCGCCGCCACCATCCGCTGCTTTGGCTGGACCGCCG
AGGCGCTGGACAAGGTCTATGGCGAGGTCGCGCCCACCGGCGAGGACGAACTGGGCCTGGTCACGCGCGAGCCGCTGGGC
GTGGTCGCCGCGATCGTGCCGTGGAACTTCCCGCTGCTGATGGCGGCCTGGAAGCTGGCGCCGGCGCTGGCCACCGGCAA
CTCGGTGGTGATCAAGCCTTCGGAGAAGTCGCCGCTGAGCGTGCTGCGCCTGGCCGAGCTGGTGGCCGAGGCCGGCATCC
CGGAGGGCGTGTTCAACGTGCTGCCCGGCTTTGGCCAGGAGGCCGGCGAGGCACTTGCGCTGCACATGGATGTCGATGGC
CTGGTGTTCACCGGCTCGACCGCGGTGGGCAAGCGCCTGCTGCAGTGCGCGGGCCTGTCGAACATGAAACGCGCCTACAT
GGAGTGCGGCGGCAAGAGCCCGAACATCGTGTTCGCCGACGCCCCTGACCTGGCCAAGGCCGCCGAAGCCGCGGCCATGG
GCATCTTCTACAACCAGGGAGAGGTCTGCACCGCCGCCTCGCGCCTGCTGGTGGAGCGCAGCATCAAGGACGAGTTCGTC
GCCCGCGTGGTCGAGGCCGGCAGGAAGATGCAGCCGCGCCACCCGCTGGAACCCGGCGCGCCGATGGGCGCCCTGGTCGA
CGAGACCCAGACCAGGCGCGTGCTCGACTACATCGCCAAGGGCCAGGCCGAGGGCGCGAAACTGGCCCTGGGCGGCAACC
GCATCGCGCCGGTGGACGGCGGCTGCTACGTCGAGCCGACCGTGTTCGACGACGTGCGCCCGGAGCACACCATCTCCCGC
GAAGAGATCTTCGGCCCGGTATTGTCGGTGATCCCGTTCGACGACGAGGCCCAGGCCCTCAAGATCGCCAACGACACCGA
GTACGGCCTGGCCGCCGGCGTCTGGACCGCCAACCTCTCCCGCGCCCACCGCGTCGCCCGCGGCCTGCGCGCCGGCAGCG
TCTGGGTGAACTACTGGGACGGTGGCGACATGACCGCCCCCTTCGGCGGCTACAAGCAGTCCGGTAACGGCCGCGACAAG
TCGCTCCATGCCTTCGACAAGTACACCGAGGTCAAGGCGACCTGGATCAACCTCGCGGACTAG

Protein sequence :
MSNPRTRADWQAMADGLELRTRAFIDGQYVDAADGRTFDCTSPIDGRVLGQVARAGQADVERAVRAARRSFEAGHWSRAK
PVKRKKTLQKLVQLIEQHADELALLETLDMGKPIDDARNVDIAATIRCFGWTAEALDKVYGEVAPTGEDELGLVTREPLG
VVAAIVPWNFPLLMAAWKLAPALATGNSVVIKPSEKSPLSVLRLAELVAEAGIPEGVFNVLPGFGQEAGEALALHMDVDG
LVFTGSTAVGKRLLQCAGLSNMKRAYMECGGKSPNIVFADAPDLAKAAEAAAMGIFYNQGEVCTAASRLLVERSIKDEFV
ARVVEAGRKMQPRHPLEPGAPMGALVDETQTRRVLDYIAKGQAEGAKLALGGNRIAPVDGGCYVEPTVFDDVRPEHTISR
EEIFGPVLSVIPFDDEAQALKIANDTEYGLAAGVWTANLSRAHRVARGLRAGSVWVNYWDGGDMTAPFGGYKQSGNGRDK
SLHAFDKYTEVKATWINLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-131 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-77 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-79 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-78 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_2109 YP_004147176.1 aldehyde dehydrogenase VFG0082 Protein 5e-78 42