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Name : Psesu_1703 (Psesu_1703) Accession : YP_004146776.1 Strain : Pseudoxanthomonas suwonensis 11-1 Genome accession: NC_014924 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1879355 - 1880884 bp Length : 1530 bp Strand : - Note : KEGG: xcb:XC_2336 motif 3; other site; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGAGCCAGTCCAACGAAACCGTCCCTGCCGTCGCGCCTGTCGACGAGAACCACCTGATCGCCGAGCGCCGCGCCAAGCT TGCGGCCCTGCGCGAGCGCGGCATCGCCTTCCCCAACGACTTCAAGCGCGCCGACTACGCCGGCGACCTGCAGGCCGAGT TCGCCGACGCCGGGCAGTGGACCGGCGAGGCGCTGGAAGCGCTGCCGCGCACCGTGGCCATCGCCGGCCGCCTGATGGCC AAGCGGGTGATGGGCAAGGCCAGCTTCGCCCAGGTGATGGACGAGTCCGGCCGGATCCAGCTGTTCCTGCAGGGCAACGT GCTGGGCGAGGCCTACGAGGCGTTCAAGTCGTTCGACATCGGCGACATCGTCGCGGTCGAGGGCGGCCTGACCCGCACCC GCACCGGCGAGCTGTCGCTCAAGGCCACCAGCCTGCGCCTGCTGGTCAAGTCGCTGCGCCCGCTGCCGGACAAGTGGCAC GGCCTGAGCGACGTGGAGCAGCGCTACCGCCAGCGCTACGTCGACCTGATCGTGACCCCCGAGGCGCGCGAGGTGTTCGT CAAGCGCAGCAAGATCATCCGTGCGATCCGCTCCTGGCTGGACGAGCGCCGCTTCCTGGAAGTGGAGACGCCGATGATGC ACTACATCCCCGGTGGCGCCACGGCCAGGCCGTTCGTGACCCACCACAATGCGCTGGACCTGCAGCTGTACCTGCGCGTG GCGCCGGAGCTGTACCTCAAGCGCCTGGTCGTCGGCGGCCTGGAGCGGGTGTACGAGATCAATCGCAACTTCCGCAACGA GGGCGTGTCCACCCGGCACAACCCCGAGTTCACCATGCTCGAGCTGTACGAGGCCTACGCCACGTACCACGAGGTCATGG ACCTGACCGAGAACGTGATCCGCGATACCGCGCGCAGCGTCCTCGGCACCACCGAGGTGGAGTGGGAAGGACAGAGGATC GACCTGGGCCCGGCGTTCCGGCGCTGGCGCATGGACGAGGCCGTGCGCCACCACAACCCGGAGATCAGCGCCGCCGACTG CACCGACCGCGAGGCCCTGCTGCGCCACTGCGAGCGCCTGGGGATCAAGGTCAAGCCGGCCTGGGGCTGGGGCAAGCTGC TGTTGGAGATCTTCGAGGCCACGGTCGAGCACACCCTCATCCAGCCGACCTTCATCACCGATCACCCGGTGGAGGTCAGC CCGCTGGCGCGCGCCTCGGACACCGAGCCGGGCTACACCGACCGCTTCGAGCTGTTCATCAACGGCAAGGAGCTGGCCAA CGGCTTCTCCGAGCTCAACGACCCCGAGGACCAGGCCGCGCGCTTCCAGGCGCAGGTCGCGGCCAAGGAGGGCGGCGACG ACGAGGCCATGCACTACGACGCCGACTACATCCGCGCGCTGGAGTACGGCATGGCCCCGACCGGAGGCCTGGGCATCGGC ATCGACCGCCTGGTGATGCTGCTGACCGGCAGCACCTCGATCCGCGACGTGCTGCTGTTCCCGTACATGCGTCCCGGCCA GCCGGGCTGA Protein sequence : MSQSNETVPAVAPVDENHLIAERRAKLAALRERGIAFPNDFKRADYAGDLQAEFADAGQWTGEALEALPRTVAIAGRLMA KRVMGKASFAQVMDESGRIQLFLQGNVLGEAYEAFKSFDIGDIVAVEGGLTRTRTGELSLKATSLRLLVKSLRPLPDKWH GLSDVEQRYRQRYVDLIVTPEAREVFVKRSKIIRAIRSWLDERRFLEVETPMMHYIPGGATARPFVTHHNALDLQLYLRV APELYLKRLVVGGLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYHEVMDLTENVIRDTARSVLGTTEVEWEGQRI DLGPAFRRWRMDEAVRHHNPEISAADCTDREALLRHCERLGIKVKPAWGWGKLLLEIFEATVEHTLIQPTFITDHPVEVS PLARASDTEPGYTDRFELFINGKELANGFSELNDPEDQAARFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIG IDRLVMLLTGSTSIRDVLLFPYMRPGQPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-131 | 55 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 8e-79 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psesu_1703 | YP_004146776.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-131 | 55 |
