|
Name : Psesu_1494 (Psesu_1494) Accession : YP_004146572.1 Strain : Pseudoxanthomonas suwonensis 11-1 Genome accession: NC_014924 Putative virulence/resistance : Virulence Product : ATPase, FliI/YscN family Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 1649055 - 1650470 bp Length : 1416 bp Strand : - Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: xca:xccb100_2220 flagellum-specific ATP synthase; SMART: ATPase AAA DNA sequence : ATGAGTCCCGCTCCCGCCAACGGCCAGGCCCCGGCGCTCGGAGGCGCCGTTCCCGCCGACTGGCTGTCCGCGCGCAACCT GCGCCTGTCCATGCGCCTGGGCGGCATCGCCCTGGACCCGGCCGCCGGACGCGGCCTGATCCGCGAAGGCATCCTCCGCC GCGCCGTCGGCCTGACCCTGGAAGCCACCGGCTGCGAGGCGCCGATGGGCGCCACCTGCAAGGTGGAAGTGGCCGATGGC GGCTGGGTCGAAGCCGAGGTCGTGGGCTTCGCCGGCGACCGCACCTCGCTGATGCCCAGCGCCGAATTGCACGGCCTGCT GCCCAACGCCCGGGTGGTGCCGGTGCGCCGCCGCGGCGGCGTCGAGGTCGGCGAAGGCCTGCTCGGCCGGGTCATCGACT CCGACGGCGTGCCGCTGGACGGCAAGGGCCCGGTCCGCGCCGAAGGCAGCGTCGGCATGGCCGGAGTCGCAATAAACCCG CTGGCGCGCGAACCGATCATCCAGCCGCTGGACGTCGGCGTGCGCGCGATCAACGCCCTGCTGCCGATCGGCCGCGGCCA GCGCGTCGGCCTGTTCGCCGGTTCCGGCGTCGGCAAGTCGACCCTGCTGGGCATGATGACCCGCTTCACCTCGGCCGACG TGATCGTCGTGGGCCTGATCGGCGAGCGTGGCCGCGAAGTGCGCGATTTCGTCGAGACCACCCTGGGCGAGGAAGGGCTG CGCCGCGCCGTGGTCGTGGCCGCCCCCGCCGACCGACCGCCGCTGGCGCGACTGCACGGTGCCTACCGCGCCACCGCCAT CGCCGAGTGGTTCCGCGACCAGGGCCTGAACGTGCTGCTGCTGATGGACTCGCTGACCCGCTTCGCCCAGGCCCAGCGCG AGATCGGCCTGTCGGTGGGCGAGCCGCCGACCACCCGCGGTTACCCGCCGAGCGTGTTCGCCAAGCTGCCGGCCCTGGTC GAGCGCGCCGGCAACGGTGCGGCAGGTCGCGGCTCGATCACCGCCTTCTATACGGTGCTGACCGAGGGCGACGATCCGCA GGACCCGATCGCCGACGCCGCCCGCGCCATCCTCGACGGCCACATCCTGCTGTCGCGCCGGATCGCCGACGCCGGCCTGT ACCCGGCCATCGACGTCGAATCCTCGGTCAGCCGCGTGGTCCAGGACATCGCCGACGAGACCTGGCGCGAGCGCATCCGC GCGCTCAAGCGCCTGGTCGCTGCCTACAACGCCAACCGCGACCTGATCGCCATCGGCGCCTACCAGCGCGGCAACGACCC GGTGGTTGACGAGGCCCTGGCGCGTTGGCCGGAGATCATGGAGTTCCTGGGCCAGGACGTGCTGCGCTCGGCCGACCTGC AGCAGAGCCGCCAGGCCCTGGATGACGTGCTGCACCTGAAGGAGAACGCCGCATGA Protein sequence : MSPAPANGQAPALGGAVPADWLSARNLRLSMRLGGIALDPAAGRGLIREGILRRAVGLTLEATGCEAPMGATCKVEVADG GWVEAEVVGFAGDRTSLMPSAELHGLLPNARVVPVRRRGGVEVGEGLLGRVIDSDGVPLDGKGPVRAEGSVGMAGVAINP LAREPIIQPLDVGVRAINALLPIGRGQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGL RRAVVVAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTRGYPPSVFAKLPALV ERAGNGAAGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSRRIADAGLYPAIDVESSVSRVVQDIADETWRERIR ALKRLVAAYNANRDLIAIGAYQRGNDPVVDEALARWPEIMEFLGQDVLRSADLQQSRQALDDVLHLKENAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-74 | 52 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-75 | 52 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-74 | 52 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-74 | 52 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-75 | 51 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-76 | 50 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-76 | 50 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 4e-76 | 50 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-75 | 50 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 7e-67 | 49 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 7e-61 | 49 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 8e-61 | 49 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-60 | 49 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 6e-55 | 47 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 2e-56 | 45 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 2e-56 | 45 |
| hrcN | AAB06001.1 | HrcN | Virulence | Hrp PAI | Protein | 7e-59 | 45 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-56 | 44 |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 1e-63 | 44 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 3e-56 | 44 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 6e-58 | 44 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 1e-58 | 44 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 1e-57 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG1254 | Protein | 1e-98 | 61 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG2499 | Protein | 3e-95 | 58 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG2331 | Protein | 1e-93 | 57 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG0390 | Protein | 5e-69 | 50 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG0192 | Protein | 1e-67 | 50 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG0048 | Protein | 7e-70 | 49 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG0515 | Protein | 4e-61 | 49 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG2144 | Protein | 2e-68 | 46 |
| Psesu_1494 | YP_004146572.1 | ATPase, FliI/YscN family | VFG1008 | Protein | 3e-53 | 41 |
