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Name : Psesu_1389 (Psesu_1389) Accession : YP_004146467.1 Strain : Pseudoxanthomonas suwonensis 11-1 Genome accession: NC_014924 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1534660 - 1536570 bp Length : 1911 bp Strand : + Note : PFAM: polysaccharide biosynthesis protein CapD; KEGG: xal:XALc_1597 sugar epimerase protein DNA sequence : ATGAAAACCGGCCCAGCACTGCCAGTCTCACTCCCGCGTACGGCCATCGTCCTGCACGACCTGCTCATGGCGGCCGTGTG CTGGCAGGCACTGCACGTGCTGCGTTACGGCGCCCGCTCCGAGACGTACGACTGGACCCAGCTGACGCCGACCCTCGCCA TCGTGCTGGTCGCACAGGGCCTGGTGTTCTGGCGGGTCGGGCTCTATCGCGGCCTGTGGCGTTTCGCCAGCGTTCCGGAC ATCTGGAACATCCTCAAGGCCGCCGGTCTTGGCACCGTCGCCATCGTCATCTGCCTGGCAATCTACAACCGCATGGACGC GCTGCCGCGTGCAGTGCTGTTCCTCTATCCGCTGGCCCTGGCCGCGATGCTCGGCGTGCCGCGCCTGCTGTACCGGGTGT GGAAGGACTACAACCTTTCCCGCAGCACCGCGACCCAGCAGCGCGTCCTGATCATGGGTGCCGGCCAGGCGGCCGACGCC CTGGTGCGCGACCTGCGCCGCTCCGGCGCCTACCAGCCGGTCGGTTTCCTCGACGACGCCCCGCACCTGCAGGGATCGCA GCTGCACGGCATGCCGGTGCTGGGAACGCTTGAGGAAGCGGCTACCGTGGCCCGCGAGGTCGGCGCCGGCATGCTGGTGA TCGCCATTCCCTCGCTCGACGCCGCCGGCATGCAGCGCGTGCTCGGCATCTGCGAGCACAGCGGCCTGCCGTTCCGCACC GTGCCGCGCCTGACCGACGTGCTCGAGGGCAAGGCCCTGCCGGGCGAGCTCAAGGAAGTGGCGATCGAGGACCTGCTGCA CCGCAAGCCGGTGACGCCGGACTGGGGCCTGATCCGCGACTGGCTGGGCGGCCGCACCGTGATGGTGACCGGCGCCGGTG GATCGATCGGCTCGGAGCTGTGCCGCCAGTGCGCGCGCCACGGTGCCAGCCGGATCGTGCTGCTGGAGATTTCCGAACTG GCCCTGCTGACCATCCATGCCGAGCTGCAGGACGCGTTCCCCGGCGTCGAGGTCGTGGCGGTGCTGGGCGACTGCGGTGA CCCGGCGGTGACCCGCCGTGCCCTGGAGCGTTGCGCACCCGACGCTGTCTTCCATGCCGCCGCCTACAAGCAGGTCCCGC TGCTGGAAGGCCAGCTGCGCGAGGCCGTGCGCAACAACGTGCTGGCGACCCACACCGTGGCCGAGCTGTGCCGCGAGTAC CGGGTGGGCACCTTCGTCCTGATCTCCACTGACAAGGCGGTCGATCCGGCCAACGTGCTGGGCGTGTCCAAGCGGGTGGC CGAGATGATCGCCCAGTCCATGGACGAGCGGGTCGAGGGCACGCGCTACGTCACCGTGCGGTTCGGCAACGTGCTGGACT CGGCCGGCAGCGTGGTCCCGCTGTTCCGCGAGCAGATCCGCCGCGGTGGCCCGGTGACCGTCACCGACCCCGAGGTCACC CGCTACTTCATGACCATCCCCGAGGCCTGCCAGCTGATCATGCAGGCCGCCGCCTCCGGTTCGCACGCGGCGATCTACAC CCTGGACATGGGCGATCCGGTGCCGATCCGGCTGCTGGCCGAGCAGATGATCCGCCTGGCCGGCAAGCAGCCGGGGCGGG ACATCGCCATCGTCTATACCGGGCTGCGCCCGGGCGAGAAACTGCACGAAACCCTGTTCTACCCGGACGAGCACTACCGT CCCACCGCCCACCCCAAGATCCTCGAGGCGGGGGCGCGGGGGTGCCCGGCCGACCAGGTCCTGCAGGAAGTCGAACACAT GCGCTTCGCAGTCTCGCGCTATGATGAGAGCACGTTGCGGCAGGCCCTGCAGGTCCTCGTCCCCGAGTTCTCGCCCCGGG CTGCCGCTGAACCCGAAAACACCGCAACGGTGGTTCAGTTCCCAGCTCGAGAGGCAGCAAGGACAAGATGA Protein sequence : MKTGPALPVSLPRTAIVLHDLLMAAVCWQALHVLRYGARSETYDWTQLTPTLAIVLVAQGLVFWRVGLYRGLWRFASVPD IWNILKAAGLGTVAIVICLAIYNRMDALPRAVLFLYPLALAAMLGVPRLLYRVWKDYNLSRSTATQQRVLIMGAGQAADA LVRDLRRSGAYQPVGFLDDAPHLQGSQLHGMPVLGTLEEAATVAREVGAGMLVIAIPSLDAAGMQRVLGICEHSGLPFRT VPRLTDVLEGKALPGELKEVAIEDLLHRKPVTPDWGLIRDWLGGRTVMVTGAGGSIGSELCRQCARHGASRIVLLEISEL ALLTIHAELQDAFPGVEVVAVLGDCGDPAVTRRALERCAPDAVFHAAAYKQVPLLEGQLREAVRNNVLATHTVAELCREY RVGTFVLISTDKAVDPANVLGVSKRVAEMIAQSMDERVEGTRYVTVRFGNVLDSAGSVVPLFREQIRRGGPVTVTDPEVT RYFMTIPEACQLIMQAAASGSHAAIYTLDMGDPVPIRLLAEQMIRLAGKQPGRDIAIVYTGLRPGEKLHETLFYPDEHYR PTAHPKILEAGARGCPADQVLQEVEHMRFAVSRYDESTLRQALQVLVPEFSPRAAAEPENTATVVQFPAREAARTR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-79 | 41 |
