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Name : Psesu_1326 (Psesu_1326) Accession : YP_004146404.1 Strain : Pseudoxanthomonas suwonensis 11-1 Genome accession: NC_014924 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1457524 - 1458822 bp Length : 1299 bp Strand : + Note : KEGG: xcb:XC_2091 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; region: UDPG_MGDP_dh_C; pfam03720; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation DNA sequence : ATGCAGGCGACCGACATCGAAGTCCCCCTTCCCGCGGATGACGCCCGCGTCGCGGTCATTGGGCTGGGGTACGTGGGTTT GCCCCTTGCGGTGGCTTTCGGGGCGCGCAGGCGGGTCCTGGGCTTCGACGTCGATGCGGCGCGTGTGGCGGAACTGCGCG CCGGCCATGACCGCACCCGCGAACTAGCGGCCGACGCGCTGGCCTCGGCCGGCGGGCTGGAGCTGGGTTCCGATCCGGCG GGCCTGCGCAGCTGCGCGATCTTCATCGTTGCCGTGCCGACGCCGATCGACAGTTTCCGCGAGCCGGACCTGGAGCCGCT GCGCCAGGCCACCAGGCTGGTGGCCGCCGCGCTGAAGCCGGGCGACCTGGTGATCTACGAATCCACGGTCTATCCCGGCA CCACCGAGGAGATCTGCGTACCGATCCTGGAAGAGGGTTCGGGACTGCGCTTCAACGTCGATTTCAGCTGCGGTTACAGC CCCGAGCGGGTCAGCCCGGGCGACCACCATCGGCGCCTGGCCGACATCCGCAAGATCACCTCCGGCTCGCATCCGGCTGC CGCGCGCGCCGTGGACGCGCTGTACCGTTCGATCATCACCGCGGGCACTTGGCCGGCGCCCTCGATCCGCGTGGCCGAGG CGGCCAAGGTGGTCGAGAACATCCAGCGCGACGTCAACATCGCCCTGGTCAACGAACTGGCGCTGGTGTTCGACCGGCTG GGCATCGACACCGGCGATGTGCTGGAAGCGGCCGGGACCAAGTGGAACTTCCTGCCGTTCCGCCCAGGCCTGGTCGGCGG CCACTGCATCGGCGTGGATCCGTACTACCTGCTGCACAGGTCGCGCAACGCCGGTTTCCATCCCGAGCTGATCCACACCG CGCGCGAGGTCAACGAGCGGGTGGTCGGCCACGTGGTCGGCAAGGTGCTGTCCCTGCTGCGCGAGCGCGGGCGGGAGCCG GCGCAGTCGCGGGTGCTGGTGCTGGGCGTGACCTTCAAGGAGAACTGCCCGGACCTGCGCAACAGCCGCGCGCTGGACCT GGTGCGCGAGCTGGCCGCCTCCGGCGCCCGGGTCGATGCGGTCGACCCATGGGCCAGTCCGGACGAGTCGGCCGCGCTTG GCGTGCCGCTGCAGGACGAGCCGGAGCAGGGCGCCTACGACGCCATCGTGCTGGCCGTGGTCCACGGCCAGTTCCGCGAC TGGGACGCGGGGCGCATCCGCGCGCTGGGCCGGCCCGGCGTGGTGGTCTACGACGTCAAGTCGGCGTGGCCGCGCGAAGT GGTTGACGCGCGCCTGTAG Protein sequence : MQATDIEVPLPADDARVAVIGLGYVGLPLAVAFGARRRVLGFDVDAARVAELRAGHDRTRELAADALASAGGLELGSDPA GLRSCAIFIVAVPTPIDSFREPDLEPLRQATRLVAAALKPGDLVIYESTVYPGTTEEICVPILEEGSGLRFNVDFSCGYS PERVSPGDHHRRLADIRKITSGSHPAAARAVDALYRSIITAGTWPAPSIRVAEAAKVVENIQRDVNIALVNELALVFDRL GIDTGDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLLHRSRNAGFHPELIHTAREVNERVVGHVVGKVLSLLRERGREP AQSRVLVLGVTFKENCPDLRNSRALDLVRELAASGARVDAVDPWASPDESAALGVPLQDEPEQGAYDAIVLAVVHGQFRD WDAGRIRALGRPGVVVYDVKSAWPREVVDARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-105 | 51 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-105 | 51 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psesu_1326 | YP_004146404.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 5e-106 | 51 |
