Gene Information

Name : Psesu_1313 (Psesu_1313)
Accession : YP_004146391.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Virulence
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1442829 - 1443536 bp
Length : 708 bp
Strand : +
Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter; KEGG: sml:Smlt1803 ABC transporter ATP-binding subunit; SMART: ATPase AAA

DNA sequence : 
ATGAATGAGGCCAACCCCATGGACGAGGCGCTGCGCGCCGAGGGCCTCGGCAAGACCTACGCCGAGGGCAAGCTCAGGAC
CCGCGTGTTCGACAACCTGGACCTGCGGGTGGCGGCTGGCGAGACGGTGGCCATCGTCGGCGCTTCCGGTGCCGGCAAGA
GCACGCTGCTGCACCTGCTGGGCGGGCTGGACATGCCCACCGCCGGCGAGGTCTACGTCGCCGGGCAGAAGATGTCGGCG
CTGTCCGACGGCCAGCGTGGCCGCCTGCGCAATCGCGCGCTGGGCTTCGTCTACCAGTTCCACCACCTCCTGCCGGAATT
CACCGCGCTGGAGAACGTGATGATGCCGGTGCTGCTGGCCGGCGGCGATCCGGCCGAGGCCACCAGCCGCGCGACCGCGC
TGCTGGAAGCGGTGGGCCTGGCCAAGCGCCTGGACCACAAGCCGGGCGAGCTGTCCGGCGGCGAGCGCCAGCGCGCCGCG
GTGGCGCGTGCCCTGGTCAACCGACCGGCCTGCGTGCTCGGCGACGAGCCGACCGGCAACCTCGACGAGAAGACCGCGGC
GACGGTATTCGACCTGATGCTCGAGCTCAACCGCGCCCAGCGCACCAGCCTGGTCCTGGTCACCCATGACCGCCGCCTGG
CCGGGCGCCTGGACCGGGTGCTGGAGCTGCACGAAGGCCGGCTGCGCGAGATCACCGCGGCCGTCTGA

Protein sequence : 
MNEANPMDEALRAEGLGKTYAEGKLRTRVFDNLDLRVAAGETVAIVGASGAGKSTLLHLLGGLDMPTAGEVYVAGQKMSA
LSDGQRGRLRNRALGFVYQFHHLLPEFTALENVMMPVLLAGGDPAEATSRATALLEAVGLAKRLDHKPGELSGGERQRAA
VARALVNRPACVLGDEPTGNLDEKTAATVFDLMLELNRAQRTSLVLVTHDRRLAGRLDRVLELHEGRLREITAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_1313 YP_004146391.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 7e-33 45
Psesu_1313 YP_004146391.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 4e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_1313 YP_004146391.1 lipoprotein releasing system, ATP-binding protein VFG2059 Protein 1e-15 41