Gene Information

Name : Psesu_1011 (Psesu_1011)
Accession : YP_004146092.1
Strain : Pseudoxanthomonas suwonensis 11-1
Genome accession: NC_014924
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1139586 - 1142183 bp
Length : 2598 bp
Strand : -
Note : TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS; MutS II domain protein; MutS IV domain protein; KEGG: xal:XALc_2230 dna mismatch repair protein, atpase; SMART: DNA mismatch repair protein MutS do

DNA sequence :
ATGTCCAGGACCGCAGACAAGCCAGCAGCGCCCGAGCACACCCCGCTGATGAAGCAGTTCTTCGCCGCCAAGGCGGAGTA
CCCGGACCTGCTGCTGTTCTTCCGGATGGGCGACTTCTACGAGCTGTTCTACGACGACGCGCGCAAGGCCGCGCGCCTGC
TCGACATCACCCTGACCCAGCGCGGCAGCTCCGGCGGCGCGCCGATCCCGATGGCCGGCGTGCCGGTGCATGCCTACGAG
GGCTACCTGGCGCGGCTGGTGGCGCTGGGCGAATCGGTGGCGATCTGCGAGCAGATCGGCGACCCGGCGGCGAGCAAGGG
CCTGGTCGAGCGCAAGGTGGTGCGGATCGTCACCCCCGGCACGGTCACCGACGAGGCGCTGCTGGACGAGCGCCGCGACA
CCCTGCTGATGGCGGTGGCACGCGGGCGTTCCGGCTACGGCCTGGCCTGGGCCGATCTTTCCGCCGGCCGCTTCCTGGTC
AGCGAGGTCGAGAACGCCGACCAGCTGGAAGCCGAACTGGCGCGCCTGGAGCCGGCCGAACTGCTGGTGCCGGACGAGGA
AGGCTGGCCGCCGCTGTCCGCCGGTGCGCTGCGCCGCCGGCCACCGTGGCTGTTCGATCCGGACAGCGGCCGTCGCCAGC
TGCTGCGCTTCTTCGGCCTGCACGACCTCACCGGCTTCGGCATCGACGACCGTCCGCTGGCGATCGCCGCCGCCGGCGCG
CTGCTGGGCTACGTCGAGGAAACCCAGAAGCAGCAGCTGCCGCACCTGACCTCGATCGCGCTGGAGACCTCCGGCGAGGC
GATCGCGATGAACGCAGCGACCCGCCGCCACCTGGAGCTGGACACCCGGGTCGACGGCCAGACCCGCCACACCCTGCTGG
GCGTGCTGGATTCGACCATCACCCCGATGGGCGGACGCCTGCTGCGCCGCTGGCTGCACCGTCCGCTGCGCGACCGCAAC
GTCCTCGGCGGCCGCCACCATGCGGTGGCCACGCTGATCGAGCAGCGCGCCGATGCCGACCTGCGCGACGGCTTCCGCGG
CCTGGGCGATGTCGAACGCATCCTCACCCGCGTAGCCCTGCGCTCGGCGCGCCCGCGCGACCTGTCGACCCTGCGCGATG
CGCTCGCCCTGCTGCCCGGCATCCGCCAGGCACTGGCGCCGCTGGATTCGCCGCGGCTGCAAGCGCTGTCGGACGAGCTG
GGCCAGCATGACGAGACCGCACACCTGCTGGCCTCGGCGGTTGCACCGCAGCCACCGCTGAAGCTGGCCGACGGCGGCGT
GATCGCCGAGGGCCATGACGCCGAGCTGGACGAGCTGCGCCGCCTGTCCACCAATGCCGACCAGTTCCTGGTCGACCTGG
AGGCGCGCGAGCGCGCGGCCACCGGGATTGCAACCCTGAAGGTCGGCTACAACCGCGTCCACGGCTATTACATCGAGATC
AGCAAGGGCCAGTCCGACAAGGCGCCGGTGCATTACACCCGGCGCCAGACCCTGACCGGCGCCGAGCGCTACATCACCGA
GGAGCTGAAGTCCTTCGAGGACAAGGTGCTGTCCGCGCGCGAGCGTGCGCTGGCGCGCGAGAAGTTCCTGTACGAGGCGC
TGCTGGATTCGCTCAACACCGTGCTGGAGCCGCTCAAGCGCTGCGCCGGCGCGCTCAGCGAGCTGGACGTGCTGGCCGCC
TTCGCCGAACGCGCGCAGGCGCTGGACTGGGCGCGCCCGGAGCTGACCGACTCACCCTGCCTGTGCATCGAGCGCGGCCG
CCATCCGGTGGTCGAGGCGGTGCGCGAGGAACCGTTCGAGCCCAACGACCTGGAGCTGTACGGCGACCGCGACGGCCAGG
CGCGGCGGATGCTGGTGATCACCGGCCCGAACATGGGCGGCAAGAGCACCTACATGCGCCAGAACGCGCTGATCGTGCTG
TTGGCGCACATCGGCAGCTTCGTGCCGGCCAGCCGCGCGGTGATCGGCCCGATCGACCGCATCCTCACCCGCATCGGCGC
CGGCGACGACCTGGCCCGCGGCCAGTCCACCTTCATGGTGGAGATGGCCGAGACCAGCTACATCCTCCACCACGCCACCG
AGCAGTCGCTGGTACTGATGGACGAGATCGGCCGCGGCACCTCGACCTACGACGGCCTCGCCTTGGCCGACGCGGTCGCG
CGCCACCTGGCCACGGTCAACCGCTGCTGGACCCTGTTCGCCACCCACTACTTCGAACTGACCTCGCTGGCCACGCCGGA
GAGCGGCATCGCCAACGTGCACCTGGACGCGGTCGAGCACGGCGATTCGCTGGTGTTCATGCACGCGGTGCGCGACGGCG
CGGCCGACCGCAGCTTCGGCCTGCAGGTGGCGGCGCTGGCCGGCCTGCCCAAGGCGACGCTGGCGCAGGCACGCCGTCGC
CTGGCCGAACTCGAGCAGCGTGGCCGCGAAACACACGCGGCCGAGGTCGCGCCGCAGGCGCTGGATGCCCCGCAGCAGTT
CGGCCTGTTCGCGCAGGCGCCGTCGGCCGCGCAGGAAGCACTGGCCGCGCTGGACCCGGACGAGCTGACGCCGAAGCAGG
CGCTCGAGGCGCTGTACCGGCTGAAATCGCTGCTTTAA

Protein sequence :
MSRTADKPAAPEHTPLMKQFFAAKAEYPDLLLFFRMGDFYELFYDDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYE
GYLARLVALGESVAICEQIGDPAASKGLVERKVVRIVTPGTVTDEALLDERRDTLLMAVARGRSGYGLAWADLSAGRFLV
SEVENADQLEAELARLEPAELLVPDEEGWPPLSAGALRRRPPWLFDPDSGRRQLLRFFGLHDLTGFGIDDRPLAIAAAGA
LLGYVEETQKQQLPHLTSIALETSGEAIAMNAATRRHLELDTRVDGQTRHTLLGVLDSTITPMGGRLLRRWLHRPLRDRN
VLGGRHHAVATLIEQRADADLRDGFRGLGDVERILTRVALRSARPRDLSTLRDALALLPGIRQALAPLDSPRLQALSDEL
GQHDETAHLLASAVAPQPPLKLADGGVIAEGHDAELDELRRLSTNADQFLVDLEARERAATGIATLKVGYNRVHGYYIEI
SKGQSDKAPVHYTRRQTLTGAERYITEELKSFEDKVLSARERALAREKFLYEALLDSLNTVLEPLKRCAGALSELDVLAA
FAERAQALDWARPELTDSPCLCIERGRHPVVEAVREEPFEPNDLELYGDRDGQARRMLVITGPNMGGKSTYMRQNALIVL
LAHIGSFVPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATEQSLVLMDEIGRGTSTYDGLALADAVA
RHLATVNRCWTLFATHYFELTSLATPESGIANVHLDAVEHGDSLVFMHAVRDGAADRSFGLQVAALAGLPKATLAQARRR
LAELEQRGRETHAAEVAPQALDAPQQFGLFAQAPSAAQEALAALDPDELTPKQALEALYRLKSLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 3e-176 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psesu_1011 YP_004146092.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 56