Gene Information

Name : Mesci_0888 (Mesci_0888)
Accession : YP_004140103.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 932368 - 933042 bp
Length : 675 bp
Strand : -
Note : KEGG: mlo:mlr4457 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCGACTGCTTCTCGTCGAGGACGACCACAGGACGGCCGACTATATCGTCAGGGGACTGACCGAGGCCGGCCATGTCTG
CGACCTCCTGCGCAACGGCCATGACGGGCTGTTCGCGGCGACCCGGGGCAAATACGACGTGATCGTCGCCGATCGGATGA
TCCCCGGTCTCGACGGCCTGTCGATGGTCAAGGCGGTGCGCGCCGCCGGCGTGCGCACGCCGGCGATCTTCCTCACCTCC
GTCGGCGGCATCGACGACCGCGTCGAGGGGCTCGAGGCCGGCGGCGACGACTATCTGGTCAAGCCCTTCGCCTTTTCCGA
ACTCCTCGCCCGCATCAACGCGCTTGGCCGGCGGCCGGCGGCGCAGGAGCAGAAAACCGTCCTGCGGGTCGCCGACCTCG
AAATGGACCTGATCATGCGCCGCGTCACGAGGCGGGGCCAGCCGATCGACCTGCAGCCGCGGGAGTTCAGCCTGCTGGAA
GTGCTGATGCGCGGCGAAGGCCGCGTCATCACCCGCACCATGCTTCTGGAGCGTGTCTGGGATTTTCATTTCGATCCCAG
GACCAGCGTCGTCGAGACCCATATCAGCCGACTGCGGGCCAAGGTCGACAAGCCCTTCGAAACCCAGCTCATCCACACCG
TCCGCAACACAGGCTACAGCCTGCACGCGCCATGA

Protein sequence : 
MRLLLVEDDHRTADYIVRGLTEAGHVCDLLRNGHDGLFAATRGKYDVIVADRMIPGLDGLSMVKAVRAAGVRTPAIFLTS
VGGIDDRVEGLEAGGDDYLVKPFAFSELLARINALGRRPAAQEQKTVLRVADLEMDLIMRRVTRRGQPIDLQPREFSLLE
VLMRGEGRVITRTMLLERVWDFHFDPRTSVVETHISRLRAKVDKPFETQLIHTVRNTGYSLHAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-44 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-43 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_0888 YP_004140103.1 response regulator receiver BAC0125 Protein 2e-50 51
Mesci_0888 YP_004140103.1 response regulator receiver BAC0638 Protein 2e-45 49
Mesci_0888 YP_004140103.1 response regulator receiver BAC0083 Protein 8e-51 48
Mesci_0888 YP_004140103.1 response regulator receiver BAC0111 Protein 2e-52 48
Mesci_0888 YP_004140103.1 response regulator receiver BAC0197 Protein 3e-48 48
Mesci_0888 YP_004140103.1 response regulator receiver BAC0308 Protein 2e-48 46
Mesci_0888 YP_004140103.1 response regulator receiver BAC0347 Protein 2e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_0888 YP_004140103.1 response regulator receiver VFG0596 Protein 2e-44 46
Mesci_0888 YP_004140103.1 response regulator receiver VFG1389 Protein 5e-32 44