Gene Information

Name : Mesci_4924 (Mesci_4924)
Accession : YP_004144079.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 5060166 - 5061629 bp
Length : 1464 bp
Strand : +
Note : KEGG: mlo:mll7608 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
ATGCGCGCTCAGCCCACGGCATCGCACTATGTCAACGGACGCTACATCGAGGACGAAGGCGGCGCCCCGCTGCCGGTCAT
CTATCCGGCAACCGGCGAGACCATCGCCATGCTGCGTTCGGCAACGCCGAACGTGCTGGAACTCGCCGTCGAGGCCGCGC
GGGCGGCGCAGCCCGCCTGGGCGCGGCTGAAGCCGGTCGAGCGCGGGCGCATCCTGCGCCGCGCCGCCGACATATTACGC
GCCCGCAACGCCGACCTCGCTCGCATCGAGACGCTGGACACCGGCAAGGCGATCCAGGAAACGTTGGTGGCGGATGCGCC
CTCGGCTGCGGACTGCCTTGAATATTTCGGCGGTGCCGTTGCCGCCTACAACGGCGAGTCGGTCGATCTCGGCGGACCCT
TCGCCTACACAAGGCGCGAAGCGCTCGGCGTCTGTGTCGGCATCGGCGCATGGAACTACCCGATCCAGATCGCCGGCTGG
AAATCGGCACCGGCGCTCGCCATGGGCAATGCCATGGTGTTCAAGCCGTCGGAAAACACGCCGCTGTCGGCGCTGGCACT
GGCCGAGATCTACAGCGAAGCGGGGCTACCCGACGGCTTGTTCAACGTTGTGCAGGGCTATGGCGATGTCGGCGCCGGGC
TTGTCGGCCACGATGTCGTCGCCAAGGTCTCGGTGACCGGTTCGGTGCCGACCGGCCGCAAGGTGCTGTCGCTTGCCGGC
TCGAAGATGAAGCACGCGACGATGGAACTCGGGGGCAAGTCGCCGCTGATCGTGTTCGACGATGCCGACATCGAGAACGC
CATTGGCGGCGCCATGCTCGGCAATTTCTATTCGACCGGACAGATCTGCTCCAACGGCACGCGCGTCTTCGTGCAGAGCG
GCATCCACGACCGCTTTGTCGACCGTCTGATAGAGCGGACCAAGAAAATCCGCATCGGCGACCCGCTCGATCCCGAAACC
CAGATGGGACCGCTGGTCTCCAAGGCGCAGCACGACAAGGTGGCCGGCTATATCGAGATCGGCAAGCAGGATGGAGCGAC
GCTTGCTTGCGGCGGCAATGTGCCTTCGCTGCAGGGCTTTCAGGGCGGCTTCTTCGTCGAGCCGACGGTGTTCACCGGCG
TGACCGATGGCATGCGCATCGCCCGTGAAGAAATTTTCGGACCAGTGATGAGCGTGTTGAAATTCGACGGCGAGGACGAG
GTGATCGACCGCGCCAACGACACCGAATTCGGCCTCGCTGCCGGCGTCTTCACGCGCGACCTGCCGCGCGCCCACCGCGT
CATCGCCGAACTGCAGGCCGGCACCTGCTGGATCAACGCGTATAATCTGACGCCGGTGGAAATCCCGTTCGGCGGCTTCA
AACAGTCAGGCATCGGGCGTGAGAATTCACTGGCCGCACTGGCGCTCTATTCGCAGCTGAAGTCGATCTATGTCGAGACC
GGGGATGTGGCGAGCCCGTACTGA

Protein sequence :
MRAQPTASHYVNGRYIEDEGGAPLPVIYPATGETIAMLRSATPNVLELAVEAARAAQPAWARLKPVERGRILRRAADILR
ARNADLARIETLDTGKAIQETLVADAPSAADCLEYFGGAVAAYNGESVDLGGPFAYTRREALGVCVGIGAWNYPIQIAGW
KSAPALAMGNAMVFKPSENTPLSALALAEIYSEAGLPDGLFNVVQGYGDVGAGLVGHDVVAKVSVTGSVPTGRKVLSLAG
SKMKHATMELGGKSPLIVFDDADIENAIGGAMLGNFYSTGQICSNGTRVFVQSGIHDRFVDRLIERTKKIRIGDPLDPET
QMGPLVSKAQHDKVAGYIEIGKQDGATLACGGNVPSLQGFQGGFFVEPTVFTGVTDGMRIAREEIFGPVMSVLKFDGEDE
VIDRANDTEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSIYVET
GDVASPY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-68 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-73 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-69 42
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 2e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_4924 YP_004144079.1 betaine aldehyde dehydrogenase VFG0082 Protein 1e-73 42