Gene Information

Name : Mesci_4880 (Mesci_4880)
Accession : YP_004144036.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5015526 - 5016191 bp
Length : 666 bp
Strand : -
Note : KEGG: mlo:mlr7684 two-component system, regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCGTGTACTGGTCGTCGAAGATGACAAGGATCTCAATCGGCAGATATCGGATGCGCTGGTCGATGCCGGCTATGTCGT
CGACCGCGCCTTCGACGGCGAGGAAGGCCATTTCCTCGGCGACACCGAGCCCTATGACGCGGTCGTGCTCGATATCGGCC
TGCCGCAGATGGACGGCATCAGCGTGGTCGAGCGCTGGCGACGCGGCGGCCGCAAGATGCCGGTGCTGATCCTGACGGCG
CGCGACCGCTGGAGCGACAAGGTTTCCGGCATCGATGCCGGCGCCGACGACTACGTCACCAAGCCGTTCCACATCGAGGA
GGTGCTGGCGAGGCTACGGGCTCTGATCCGGCGCGCTGCCGGCCATGCCTCGTCCGAGCTGACCTGCGGACCGCTGCGCC
TCGACACCAAGGCCTCCAAGGCCGATGTCGGCGGCGTGCCGCTGAAGCTGACGTCGCACGAATTCCGCCTGCTTGCCTAT
CTGATGCACCATATGGGCGAGGTCGTCTCGCGGACCGAACTGGTCGAGCATCTCTACGATCAGGATTTCGACCGCGATTC
CAACACCATCGAGGTGTTTGTCGGGCGGCTGCGCAAGAAGATGGGCATCGACATGATCGAAACCGTGCGCGGCATGGGCT
ACCGCATGCGTGAGCCGGAGGCGTAA

Protein sequence : 
MRVLVVEDDKDLNRQISDALVDAGYVVDRAFDGEEGHFLGDTEPYDAVVLDIGLPQMDGISVVERWRRGGRKMPVLILTA
RDRWSDKVSGIDAGADDYVTKPFHIEEVLARLRALIRRAAGHASSELTCGPLRLDTKASKADVGGVPLKLTSHEFRLLAY
LMHHMGEVVSRTELVEHLYDQDFDRDSNTIEVFVGRLRKKMGIDMIETVRGMGYRMREPEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_4880 YP_004144036.1 response regulator receiver CP000647.1.gene1136. Protein 3e-35 47
Mesci_4880 YP_004144036.1 response regulator receiver NC_002516.2.879194.p Protein 3e-38 47
Mesci_4880 YP_004144036.1 response regulator receiver BAC0530 Protein 3e-35 47
Mesci_4880 YP_004144036.1 response regulator receiver CP004022.1.gene1005. Protein 3e-38 46
Mesci_4880 YP_004144036.1 response regulator receiver CP001138.1.gene1939. Protein 7e-35 46
Mesci_4880 YP_004144036.1 response regulator receiver NC_002695.1.913289.p Protein 4e-34 45
Mesci_4880 YP_004144036.1 response regulator receiver CP001918.1.gene2526. Protein 1e-33 45
Mesci_4880 YP_004144036.1 response regulator receiver CP000034.1.gene2022. Protein 1e-34 45
Mesci_4880 YP_004144036.1 response regulator receiver BAC0487 Protein 4e-28 42
Mesci_4880 YP_004144036.1 response regulator receiver BAC0347 Protein 6e-27 41
Mesci_4880 YP_004144036.1 response regulator receiver BAC0197 Protein 5e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_4880 YP_004144036.1 response regulator receiver VFG0475 Protein 7e-35 46
Mesci_4880 YP_004144036.1 response regulator receiver VFG1389 Protein 2e-26 42
Mesci_4880 YP_004144036.1 response regulator receiver VFG0473 Protein 2e-26 41