Gene Information

Name : Mesci_4281 (Mesci_4281)
Accession : YP_004143441.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 4418684 - 4420696 bp
Length : 2013 bp
Strand : +
Note : KEGG: smd:Smed_3922 transketolase; TIGRFAM: transketolase; PFAM: transketolase domain-containing protein; transketolase central region

DNA sequence :
ATGACCAGCCAAACAGCACTGAAGCCCGTCACCACAACCGCTCCCGTCTCGGAGCGCGACATGGCGAACGCCATTCGCGC
GCTGGCGATGGACAGCGTCCAAAAGGCGAATTCGGGTCATCCTGGCATGCCGATGGGCATGGCCGATGTCGCAACGGTGC
TGTTCAACCGCTTCATCAATATCGATCCGTCGAGACCGGACTGGCCCGACCGTGACCGTTTCGTGCTTTCAGCCGGCCAC
GGCTCGATGCTGCAATACGCACTGCATCATCTGCTCGGCTACGAAGACATGCAGGTCGAGGAATTGCAGCGATTTCGGCA
GCTGGGCAGCCGCACCGCCGGACATCCGGAATACGGCCATGCGCTTGGCGTGGAGACCACCACCGGACCGCTTGGACAGG
GCATTTCCACGGCGGTCGGCATGGCGCTGGCGGAACGCATGCTTGCCGCCCGCTACGGTGCCGATCTGGTCGATCATCAT
ACCTATGTGATTGCGGGCGACGGCTGCCTTCAGGAGGGAATCAGTCACGAGGCGATAGACCTCGCTGGTCACCTGAAGCT
TTCCCGCCTGATTGTCTTCTGGGACGACAATGCGATTTCCATTGACGGGCCGACCTCCCTCTCCACGTCGATGGACCAGC
CGGCGCGCTTCAAGGCCGCCGGCTGGGATGTCCAAAGTGTCGCCGGGCACGACATGGCAGCAGTCGCCGCGGCAATCGAG
GCGGCGCGACGGTCGGATCGGCCATCGCTGATTGCCTGCCGCACAGTGATCGGCATGGGTGCCCCCAATCTCGGCGGTTC
GGAAAAGACGCACGGCGCACCGCTGGGTGAAGCAGAGATCGCCGCGACACGCGAAAACATCGGCTGGGCCCACGCGCCGT
TCGAGGTGCCGGATGATATCCTTTTCGCCTGGCGCGAGATTGCCGGTCGCGGCGAAGCGATGCGGCGCGCCTGGGAGCAG
CGGCTTGCCGCCTCGCCGCGACGCGAGGCTTTTGAAAACGCCGTCGCCGCCGAACTGGCCGACACGGTCTTCGACGCGCT
CGAAGCCTTTCGTCGCGAACATGTCGAGAAGGCAACCAAGGTGGCGACGCGAAAAGCCTCCGAAATGGCGCTGGAGGCCA
TCAACGGCGCAACGGAATTGACCGTCGGCGGCTCGGCCGATCTGACGCACTCGAATCTGACGATCACCAAGGGCATGAAC
CGCATTGCGCCGAGTGACTATGCCGGCCGCTACATTCACTACGGCATTCGTGAGCACGGCATGGCGGCCGCCATGAACGG
CATCGCGCTGCATGGAGGTTTCGTGCCCTATGGCGGTACGTTCCTGTGCTTCGCCGATTATGCGCGCGGCGCGATGCGGC
TCTCGGCGCTCATGGGCCAGCGCGTCATCTATGTGATGACACACGATTCCATCGGCCTCGGCGAGGACGGCCCGACGCAC
CAGCCGGTCGAGCACCTTGCGATGCTGCGTGCGACGCCTAATCTCAACGTCTTCCGTCCGGCGGATGTCATCGAAACGGC
GGAGTGCTGGGAACTCGCGCTGAAGAGCAAGGATCGGCCGAGCGTCCTGGTGCTGTCGCGCCAGAACCTGCCGATGCTGC
GTCGGTCGCACAGTGACGAGAACCGCTCCCGCCAAGGTGGCTACGTCCTGCGCGAACCAGCCGAGCACCGTGCCGTCACC
CTGATCGCCACCGGCTCGGAGGTCGAGATCGCGGTTGCTGCCGCCGAAAGGCTGGAGACCGAGCATGGTGTCGCCGCCGC
CGTCGTGTCGATGCCGTGCTGGGAGCTTTTCGAGGAGCAGGAAAGCGCCACCCGCAAGGCCGTCCTCGGCTCGGCGCCGC
GCGTCGCGGTCGAAGCGGCAGCCCGGCTGGGCTGGGACCGCTGGATCGGCGAGACCGGCGCTTTCGTCGGCATGACCGGC
TTCGGCGCCAGCGCCCCTGCCCCCGACCTCTACCGGCATTTCAACATCACGTCCGAAGCGGTTGCTGCAGCGGCGCTGAA
GCTCATCATCTAG

Protein sequence :
MTSQTALKPVTTTAPVSERDMANAIRALAMDSVQKANSGHPGMPMGMADVATVLFNRFINIDPSRPDWPDRDRFVLSAGH
GSMLQYALHHLLGYEDMQVEELQRFRQLGSRTAGHPEYGHALGVETTTGPLGQGISTAVGMALAERMLAARYGADLVDHH
TYVIAGDGCLQEGISHEAIDLAGHLKLSRLIVFWDDNAISIDGPTSLSTSMDQPARFKAAGWDVQSVAGHDMAAVAAAIE
AARRSDRPSLIACRTVIGMGAPNLGGSEKTHGAPLGEAEIAATRENIGWAHAPFEVPDDILFAWREIAGRGEAMRRAWEQ
RLAASPRREAFENAVAAELADTVFDALEAFRREHVEKATKVATRKASEMALEAINGATELTVGGSADLTHSNLTITKGMN
RIAPSDYAGRYIHYGIREHGMAAAMNGIALHGGFVPYGGTFLCFADYARGAMRLSALMGQRVIYVMTHDSIGLGEDGPTH
QPVEHLAMLRATPNLNVFRPADVIETAECWELALKSKDRPSVLVLSRQNLPMLRRSHSDENRSRQGGYVLREPAEHRAVT
LIATGSEVEIAVAAAERLETEHGVAAAVVSMPCWELFEEQESATRKAVLGSAPRVAVEAAARLGWDRWIGETGAFVGMTG
FGASAPAPDLYRHFNITSEAVAAAALKLII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 5e-141 52
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 7e-134 48