Gene Information

Name : Mesci_0418 (Mesci_0418)
Accession : YP_004139641.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 462257 - 463582 bp
Length : 1326 bp
Strand : +
Note : TIGRFAM: xylose isomerase; KEGG: mlo:mlr5036 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel

DNA sequence :
ATGAGCAGTGGATTTTTCGGCGACATCCAGAAGATCAAATATGAAGGGCCGGATTCGACCAATCCGCTGGCCTATAGGTT
CTACAATCCCGATGAGGTCGTCGCCGGCAAGCGGCTGGAAGATCATCTGCGCTTCGCCGTTGCCTACTGGCACTCCTTTG
CCTGGCCGGGTGGCGATCCGTTCGGCGGCCAGACTTTCGACCGGCCGTGGTTTCCCAAGGCCGGCGGCGTCGACACGATG
GAGCTGGCAAAACTGAAAGCAGACGTCGCCTTCGAGATGTTCTCGTTGCTCGGCGCGCCCTACTTCTGCTTCCACGACGC
CGATGTACGGCCGGAAGGCAAGGATTTTTCCGAGAGTGCGGCGCGCCTCGATGAGATCGCCGACTACTTCGCGGGCAAGA
TGAAGCAGACCGGCGTCAAGCTGCTTTGGGGCACCGCCAATCTGTTCTCCAACCGCCGCTTCATGTCGGGCGCGGCCACC
AATCCCGATCCGGATGTCTTTGCCTACGCGGCGGCGACGGTGAAAAGCTGTATCGACGTCACCAAGCGGCTGAAGGGCGA
AAACTACGTGCTGTGGGGCGGGCGCGAAGGCTATGAGACCCTGCTCAACACCGACCTTGCGCGCGAGCAGGAACAGGCCG
GCCGGTTCCTCAGCATAGTCGTCGACTACAAGCACAAGATCGGCTTCAAGGGCACGATCCTGATCGAGCCGAAGCCGCAG
GAGCCAACCAAGCATCAGTACGATTACGATGTCGCCACGGTCTACGGCTTCCTCAAGCGCTTCGGGCTGGAGAAGGAGGT
CAAGGTCAATATCGAGCAGGGCCACGCCATCCTGGCCGGCCATTCCTTCGAGCACGAACTGGCTCTGGCCAATGCGCTCG
GCATTTTCGGTTCGATCGATATGAATCGCAACGACTACCAGTCGGGCTGGGACACCGACCAGTTCCCCAACAACGTGCCG
GAAATGGCACTGGCCTACTACCAAGTCCTGCAGGCTGGCGGCTTCAAGACCGGCGGCACCAATTTCGACGCCAAGCTGCG
CCGCCAGTCGCTCGATCCGCAGGACCTGCTGATCGGCCATATCGGCGGCATGGACTCTTGCGCTCGCGGCCTGAAAGCCG
CGGCGCGCATGGTCGAGGACAAGGCACTGTCGGCGCCGCTGGCCGAACGCTATGCCGGCTGGAACACGGCCGAGGGCAAG
GCGATGCTTGCCGGCAAGCGCACGCTTGAGGATATCGCCGAGCGTGTCGTCAAGAAGAAGATCGAGCCGCAGCCGAGGTC
CGGCCGCCAGGAACTGCTGGAAAACATCGTCAACCGCTACGTGTAG

Protein sequence :
MSSGFFGDIQKIKYEGPDSTNPLAYRFYNPDEVVAGKRLEDHLRFAVAYWHSFAWPGGDPFGGQTFDRPWFPKAGGVDTM
ELAKLKADVAFEMFSLLGAPYFCFHDADVRPEGKDFSESAARLDEIADYFAGKMKQTGVKLLWGTANLFSNRRFMSGAAT
NPDPDVFAYAAATVKSCIDVTKRLKGENYVLWGGREGYETLLNTDLAREQEQAGRFLSIVVDYKHKIGFKGTILIEPKPQ
EPTKHQYDYDVATVYGFLKRFGLEKEVKVNIEQGHAILAGHSFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVP
EMALAYYQVLQAGGFKTGGTNFDAKLRRQSLDPQDLLIGHIGGMDSCARGLKAAARMVEDKALSAPLAERYAGWNTAEGK
AMLAGKRTLEDIAERVVKKKIEPQPRSGRQELLENIVNRYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-101 49
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 9e-102 49