Gene Information

Name : Mesci_1959 (Mesci_1959)
Accession : YP_004141162.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 2047428 - 2048831 bp
Length : 1404 bp
Strand : -
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: mlo:mlr2909 flagellum-specific ATP synthase; SMART: ATPase AAA

DNA sequence :
ATGTCGCTCGACCAGCCATCCCTGCGGGCACTCGAAAGACAACTCCAGCCGGCACCGGAAGACCGGCTTGCCGCCCTGGA
ACGGGTCTGGCGGCGTTTCGCCGACGCCGAGGCACTGCTCAAGCGCGGCGGCCGCGTCATCGAAGTCACGCCCACGCACT
ACAAGGTGCACGGCCTTTCCAGCTTCGCCAGGCTGGGTGACATCGTCGAGCAGCCCGGCCATGCCGGTGCGCGCCGCGGC
GAGATCGTCAAGATCGGCCGCGACGAGGCCGTCGTGGCACCCTTCGAACGCAGCGCCGATTCCGGCATCGGTGATGCCGT
GTTCCGCCGCGGTCCGCTTGTGGTGGCACCGCATGCCTCATGGCGCGGCCGCACCATCGACGCACTCACCAGGGCGATCG
ATGGCGGCCCGCCGCTCGCCCGGGGAGACGACACATCGCGCGGCGCCCAGACGACGCCGGGCGCCATGGCGCGGCAACGC
GTCGGCACTGCCTTCATGACCGGCGTCAAGGTCATCGATATCTTCACGCCGCTCTGCTTCGGCCAGCGCCTCGGCATCTT
TGCCGGCTCCGGCGTCGGCAAGTCGACGCTGCTCGCCATGCTCGCCGGAGCCGACGCATTCGATACCGTCGTGGTGGCGC
TCATCGGCGAACGCGGCCGGGAAGTCCGTGAATTCCTCGAGGACACGATCGGCGACAGCATGGCCAAGACCATCGCCGTC
GTCGCCACCAGCGACGAAAGCGCCATGATGCGCCGGCGTGCGCCGGACACCGCCATGCGCGTCGCCGAGCATTTTCGCGA
CCAGGGGCATCGCGTTTTGCTGGTGCTGGATTCGATCACCCGCTTCGCTCACGCCTTGCGTGAGGTGGCGACGGGAACCG
GCGAGCCGCCGGTCGCCCGCGGTTATCCGGCCTCGGTGTTCACCGAATTGCCCAAGCTGCTCGAACGCGCCGGGCCGGGT
ACGGAAGGCAAGGGATCGATCACCGCCATCATTTCCGTACTGGTCGACGGCGACGATCACAACGACCCGGTCGCCGATTC
CGTGCGCGGCATCCTCGACGGCCATGTCGTGCTCGACCGCACGATCGCCGAACAGGGTCGCTATCCCCCCGTCAACCCGC
TGTCGTCCATATCGCGGTTGGCCGGAAAGGCCTGGAGCGTCGAACAGCGCGCGCTGGTGACAAGGCTGAAGTCGATGATC
TCGCGCTTCGAGGACACACGCGATATCCGCTTGCTCGGGGCCTATCAGGGCGGCGTCGATGCCGAACTCGACATCGCCGT
GCGCCAGGTGCCGCTGATCTATGAAGCGCTGACGCAAGGGCCGAAGGATCGCCCCTCAGCCGACCCGTTCTCCGATCTCG
CCCGCCACCTCAAGAGCAAGCTGAACGCCGATGCCGGAGACTGA

Protein sequence :
MSLDQPSLRALERQLQPAPEDRLAALERVWRRFADAEALLKRGGRVIEVTPTHYKVHGLSSFARLGDIVEQPGHAGARRG
EIVKIGRDEAVVAPFERSADSGIGDAVFRRGPLVVAPHASWRGRTIDALTRAIDGGPPLARGDDTSRGAQTTPGAMARQR
VGTAFMTGVKVIDIFTPLCFGQRLGIFAGSGVGKSTLLAMLAGADAFDTVVVALIGERGREVREFLEDTIGDSMAKTIAV
VATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLVLDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPG
TEGKGSITAIISVLVDGDDHNDPVADSVRGILDGHVVLDRTIAEQGRYPPVNPLSSISRLAGKAWSVEQRALVTRLKSMI
SRFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQGPKDRPSADPFSDLARHLKSKLNADAGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 6e-62 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-63 43
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-63 43
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-62 42
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-63 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-63 42
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-62 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-62 41
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-62 41
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-62 41
invC AAS66861.1 InvC Not tested SSR-2 Protein 5e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_1959 YP_004141162.1 FliI/YscN family ATPase VFG2331 Protein 3e-61 44
Mesci_1959 YP_004141162.1 FliI/YscN family ATPase VFG2144 Protein 1e-61 43
Mesci_1959 YP_004141162.1 FliI/YscN family ATPase VFG0048 Protein 1e-64 41