Gene Information

Name : Mesci_1948 (Mesci_1948)
Accession : YP_004141151.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2040292 - 2041023 bp
Length : 732 bp
Strand : -
Note : KEGG: mlo:mlr2924 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :
ATGAGAAAGTTCCTTCTCGCCACCGCCATGATCGCCGCCGCCACCTCCATCGCGGCGGCTCAGCAGCTCGATCTCGGCGG
CATCGGCAAGGCTGACGGCACCACCGTCGGCTACATCATCCAGATGTTCGGCCTGCTGACTGTTCTGTCGGTCGCGCCGG
GCCTGCTGATCATGGTGACCAGCTTCACCCGCTTCGTCATCGCCTTCTCGATCCTGCGCGCCGGCATCGGCCTGCAGTCG
ACACCGGCAAACCTCATCCTGATTTCGCTGTCGCTGTTCATGACCTTCTATGTCATGGCGCCGACCTTCGATCAGGCCTG
GAACACCGGCGTCAAGCCGCTGATGGACAACCAGATCACCCAGACCGAAGCCTTCGACAAGATTTCCGATCCGTTCCGCA
CCTTCATGCTGCACAATGTGCGTGACAAGGATTTCGACCTCTTCGCCGATCTCGCCCGCGAGCGCGGCCAGACCGTTTCG
CGCGACACCGTCGACCTGCGCATCCTGGTGCCCGCCTTCATGATCTCGGAGATCCGGCGCGGCTTCGAAATCGGCTTCCT
GATCGTGCTGCCATTCCTGGTCATCGACCTGATCGTCGCCACCATCACGATGGCGATGGGCATGATGATGCTGCCGCCCA
CTGTGGTGTCGCTGCCGTTCAAGATCCTGTTCTTCGTCCTGATCGACGGCTGGAACCTGCTTGTCGGCAGCCTGGTGCGC
TCCTTCAACTGA

Protein sequence :
MRKFLLATAMIAAATSIAAAQQLDLGGIGKADGTTVGYIIQMFGLLTVLSVAPGLLIMVTSFTRFVIAFSILRAGIGLQS
TPANLILISLSLFMTFYVMAPTFDQAWNTGVKPLMDNQITQTEAFDKISDPFRTFMLHNVRDKDFDLFADLARERGQTVS
RDTVDLRILVPAFMISEIRRGFEIGFLIVLPFLVIDLIVATITMAMGMMMLPPTVVSLPFKILFFVLIDGWNLLVGSLVR
SFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 7e-27 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 7e-27 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 7e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_1948 YP_004141151.1 flagellar biosynthetic protein FliP VFG1259 Protein 5e-50 49
Mesci_1948 YP_004141151.1 flagellar biosynthetic protein FliP VFG2338 Protein 1e-44 46
Mesci_1948 YP_004141151.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-48 46
Mesci_1948 YP_004141151.1 flagellar biosynthetic protein FliP VFG2016 Protein 8e-48 45
Mesci_1948 YP_004141151.1 flagellar biosynthetic protein FliP VFG0394 Protein 9e-34 41