Gene Information

Name : Mesci_1617 (Mesci_1617)
Accession : YP_004140824.1
Strain : Mesorhizobium ciceri WSM1271
Genome accession: NC_014923
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1676913 - 1679519 bp
Length : 2607 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; ATPase AAA; Clp ATPase-like; KEGG: mlo:mll3429 endopeptidase Clp ATP-binding chain B, ClpB; SMART: ATPase AAA

DNA sequence :
ATGAACCTTGAGAAATACTCAGAGCGCGTGCGCGGCTTTATCCAGTCCGCGCAGACCATGGCGCTTTCCCGCAACCACCA
GCAATTCACCCCTGAACATATCCTGAAAGTGCTCGTCGACGACGACGAGGGCTTGGCCGCGTCGCTGATCGAACGCGCCG
GCGGCAACGTCCGCGACGTCAAGCTTGGCGTCGAGACGGCGCTCGAAGCGATGCCCAAGGTCGAGGGCGGCAATGGCCAG
CTCTATCTGGCCCAGCCGCTGGCGAAAGTGTTTTCGACCGCCGAGGAACTGGCCAAGAAAGCCGGCGACAGTTTTGTCAC
GGTAGAGCGGCTCTTGCAGGCGCTCGCCATGGAAAAGTCGGCCAAGACCGCCGACATATTGGCCAAGGCCGGCGTCACCG
CGCAGGCGCTCAACCAGGTCATCAACGATGTCCGCAAGGGCCGCACCGCCGATTCGGCGAGTGCCGAACAGGGCTACGAC
GCGCTGAAGAAATACGCGCGCGACCTGACCGCGGATGCCCGTGCCGGCAAGCTGGACCCCGTGATCGGCCGTGACGACGA
GATCCGCCGCACCATCCAGGTGCTGTCGCGCCGCACCAAGAACAATCCGGTGCTGATCGGCGAACCGGGCGTCGGCAAGA
CGGCGATCGCCGAAGGCCTGGCACTGCGCATCGTCAATGGCGACGTACCGGAATCGCTGAAGGACAAGCAGCTGATGGCG
CTCGACATGGGCGCGCTGATTGCCGGCGCCAAATATCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTCTCCGAAGT
CACCTCGGCCAGCGGCAACATCATCCTGTTCATCGACGAGATGCACACGCTGGTCGGCGCCGGCAAGGCGGACGGCGCCA
TGGATGCGTCGAACCTGTTGAAGCCGGCGTTGGCGCGCGGCGAACTGCACTGCGTCGGCGCCACCACGCTCGACGAGTAT
CGCAAGCATGTCGAGAAGGATGCAGCCCTTGCCCGGCGCTTCCAGCCGGTTTTCGTCGACGAGCCGACGGTGGAAGACAC
CGTTTCGATCCTGCGCGGCCTGAAGGAGAAATACGAGCAGCACCACAAGGTGCGCATTTCGGATTCAGCGCTGGTGGCGG
CGGCGACGCTGTCCAACCGCTACATCGCCGATCGCTTCCTGCCGGACAAGGCGATCGACCTGGTCGACGAAGCCGCATCG
CGGCTGCGCATGCAGGTCGATTCCAAGCCTGAGGCGCTGGACGAGATCGATCGCCGCATCATGCAGCTCAAGATCGAGCG
CGAGGCGCTGAAGGTCGAGACGGACGATGCTTCGAAGGACCGGCTCGCCCGCCTGGAAAAGGAACTCGTCGGCCTTGAGG
AGGAATCGACCGAGATCACCGCCAAGTGGCAGGCCGAGAAGCAGAAGCTCGGGCTCGCCGCCGACCTGAAGAAGCAGCTC
GACGAGGCGCGCAACGACCTTGCCATTGCTCAGCGCAAGGGTGAATTCCAGCGCGCCGGCGAGCTTGCCTATGGCAAGAT
TCCGGAACTGGAAAAGAAGCTGAAGGAGGCCGAGGCCCAGGACGGCAAAGCCGGCATGGTCGAAGAGGTGGTTACCCCCG
ACCACGTCGCCCATATCGTCTCGCGCTGGACCGGCATTCCGGTCGACAAGATGCTGCAGGGCGAGCGCGACAAGCTGCTG
CGCATGGAAGACGAGATCGGCAAGCGCGTCGTTGGCCAGGGCGAGGCGGTGCAAGCTGTGTCGAAAGCGGTGCGGCGCGC
CCGCGCGGGCCTGCAGGATCCGAACCGGCCGATCGGCTCGTTCATGTTCCTCGGACCGACGGGGGTCGGCAAGACCGAGC
TGACCAAGGCGCTGGCGAGCTTTCTGTTCGACGACGAGAGCGCCATGGTGCGCATCGATATGTCGGAGTTCATGGAAAAG
CACTCGGTCGCCCGGCTGATCGGCGCGCCTCCCGGCTATGTCGGCTATGAGGAAGGCGGCGCGCTGACCGAAGCGGTGCG
GCGCCGGCCCTATCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGATGTGTTCAACGTGCTGTTGCAGGTGC
TCGACGACGGCCGCCTGACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACGCTGATCATCATGACGTCGAACCTC
GGCGCCGAATATCTCGTCAACCTCACCGAGGACCAGGATGTCGATCTGGTGCGCGACGAGGTGATGAACGTCGTCAGGGC
ATCGTTCCGGCCGGAGTTCCTCAACCGCGTCGACGAGGTGATCCTGTTCCACCGGCTGCGCCGGCAGGATATGGGCCGCA
TCGTCGAGATCCAGCTCAAGCGGCTCGAGAGCCTGCTTGTCGACCGCAAGATCACGCTATCGCTGGACCAGGAGGCGGTG
GATTGGCTGGCGGCCAAGGGCTACGACCCGGCCTATGGCGCGCGGCCGCTGAAGCGGGTGATGCAGAAGGAATTGCAGGA
CCCACTGGCGGAGAAGATCCTGCTCGGCGACATCCTCGACGGCTCGACCGTCAAGGTGACAGCCGGTTCCGACCGGCTGA
ATTTCCGCTCCAAACCGACGATCGTCGCGGCGGAAGCGGCAGCCTGA

Protein sequence :
MNLEKYSERVRGFIQSAQTMALSRNHQQFTPEHILKVLVDDDEGLAASLIERAGGNVRDVKLGVETALEAMPKVEGGNGQ
LYLAQPLAKVFSTAEELAKKAGDSFVTVERLLQALAMEKSAKTADILAKAGVTAQALNQVINDVRKGRTADSASAEQGYD
ALKKYARDLTADARAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKQLMA
LDMGALIAGAKYRGEFEERLKAVLSEVTSASGNIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY
RKHVEKDAALARRFQPVFVDEPTVEDTVSILRGLKEKYEQHHKVRISDSALVAAATLSNRYIADRFLPDKAIDLVDEAAS
RLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDRLARLEKELVGLEEESTEITAKWQAEKQKLGLAADLKKQL
DEARNDLAIAQRKGEFQRAGELAYGKIPELEKKLKEAEAQDGKAGMVEEVVTPDHVAHIVSRWTGIPVDKMLQGERDKLL
RMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALASFLFDDESAMVRIDMSEFMEK
HSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNL
GAEYLVNLTEDQDVDLVRDEVMNVVRASFRPEFLNRVDEVILFHRLRRQDMGRIVEIQLKRLESLLVDRKITLSLDQEAV
DWLAAKGYDPAYGARPLKRVMQKELQDPLAEKILLGDILDGSTVKVTAGSDRLNFRSKPTIVAAEAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-109 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 6e-110 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 4e-110 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesci_1617 YP_004140824.1 ATP-dependent chaperone ClpB VFG2076 Protein 6e-123 41