Gene Information

Name : hfeC (HICON_11160)
Accession : YP_004138260.1
Strain : Haemophilus influenzae F3047
Genome accession: NC_014922
Putative virulence/resistance : Virulence
Product : ABC-type chelated iron transport system, permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 892181 - 893029 bp
Length : 849 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAGCATTATTATTAGAACCTTTTTCCTATGATTATATGCTCAGGGCGATGATCTTGAGCACGGCAGTTGGTGGGAT
TTGTGCTTTTTTGTCTTCATACTTAATGCTTAAAGGCTGGTCTTTGATTGGCGATGCGCTTTCTCATTCTGTTGTGCCTG
GTGTCGCTATTGCTTATACCTTTTCTTTGCCTTATGCACTTGGTGCATTTTTTGCCGGAATTTTAGCCGCACTTTCCATT
CTTTGGATTAAATCCATTTCTAAACTGAAAGAAGATGCCGTGATCGGATTTATTTTTAGTACTTTCTTTGCATTAGGTCT
ATTGATCATTTCTTTAAATCCAACTGCAGTAAATGTGCAAAGTATTATTTTAGGCAATATTTTAGGTATTGCTGACGAAG
ATATTTACCAAGTGGCAATTATCATCGGCGTTTGTTTAGTATTGCTTTTACTGTTCTGGAAAGACTTATTACTGATCTTT
TTCGATGAAACACAAGCAAGAACGGTAGGGCTTTCGCCATTATTTTATAAAGTTTTGTTTTTTACTCTATTAAGTGCTTG
TGTAGTAGCTGCATTGCAAACTGTGGGTGCGATTTTAGTGATTGCGATGGTCATTACCCCGGGTGCGACGGCATATTTAC
TCACAGATAAATTCAAAACTTTATCAATCATTGCCATTATTTTAGGGGCGGTGACAAGTTTTGTTGGGGTCTATATTAGC
TATTATTTAGATGGTGCTACTGGCGGTGTGATTGTCACATTGCAAACATTATTATTCTTGGCAGCTTTCTTATTTTCACC
AAAATATGGTTTACTCACTCGCAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLALLLEPFSYDYMLRAMILSTAVGGICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYTFSLPYALGAFFAGILAALSI
LWIKSISKLKEDAVIGFIFSTFFALGLLIISLNPTAVNVQSIILGNILGIADEDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQARTVGLSPLFYKVLFFTLLSACVVAALQTVGAILVIAMVITPGATAYLLTDKFKTLSIIAIILGAVTSFVGVYIS
YYLDGATGGVIVTLQTLLFLAAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-61 63
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-61 63
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-61 63
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-61 63
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-61 63
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-31 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-31 43
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 9e-32 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-31 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hfeC YP_004138260.1 ABC-type chelated iron transport system, permease BAC0441 Protein 3e-66 71
hfeC YP_004138260.1 ABC-type chelated iron transport system, permease BAC0351 Protein 1e-61 63
hfeC YP_004138260.1 ABC-type chelated iron transport system, permease BAC0352 Protein 6e-32 42
hfeC YP_004138260.1 ABC-type chelated iron transport system, permease BAC0442 Protein 1e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hfeC YP_004138260.1 ABC-type chelated iron transport system, permease VFG0527 Protein 9e-62 63
hfeC YP_004138260.1 ABC-type chelated iron transport system, permease VFG0528 Protein 5e-32 42