Gene Information

Name : HICON_07880 (HICON_07880)
Accession : YP_004137937.1
Strain : Haemophilus influenzae F3047
Genome accession: NC_014922
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 569798 - 572383 bp
Length : 2586 bp
Strand : -
Note : -

DNA sequence :
ATGATTTCCGAAGAAAATTTCCAACAACATACGCCAATGATGCAGCAATATCTAAAACTCAAAGCGGAGAATCCAGATAT
TTTGTTGTTTTATCGCATGGGGGATTTTTACGAGTTGTTTTATGACGATGCGAAAAAAGCGGCGGCATTGTTGGATATTT
CTTTAACGAAACGAGGTCAATCTGCAGGACAGCCCATTCCGATGGCAGGAATGCCTTATCATGCGGTGGAAGGTTATTTA
GCAAAATTAGTGCAGTTAGGCGAATCTGTGGCGATTTGCGAACAGATTGGCGATCCAACGACGAGTAAAGGACCAGTGGA
ACGTCAAATTGTGCGAATTGTTACACCTGGGACAGTAAGTGATGAAGCGCTTTTGCCTGAACGCCAAGATAATCTGATTG
CTGCGGTATATCAAGAAAAAGAAAAATTTGGATTAGCCACTTTAGATATGACCTCTGGCCGTTTTCAGCTTTGTGAACCT
GCGGACAAAGAAACTTTGCGTGCGGAATTACAACGTATTGCACCTGTGGAATTGCTGTATTGTGAAGAATTTAATGAAAT
GGCTGCGATTGAACATTGTAAGGGATTACGCCGTCGCCCGATTTGGGAATTTGAACTTAGCACAGCCATTACGTTATTAA
ATCATCAATTTGGCACAAAAGATTTACGTGCCTTTGGTGTGGAAAAATCCCCTCTAGGCTTAAGTGCGGCTGGTTGTTTA
TTGCAATATGCAAAAGAAACGCAACGTACCGCATTACCCCATATTCAAAGCATTAGTTTGATTCAAAATCAAGACTGCAT
TCAGTTAGATGTCGCCACGCGCAGAAATCTTGAATTAACACAAAATCTTGCGGGTGGCACAGAAAATACGCTAGCGTCTG
TATTGGATAAATGCGTTACGCCAATGGGCAGTCGCTTATTGAAACGTTGGATTCATCAGCCTGTTCGTGATGTGGAAAAA
TTAAAACAACGCCAACAAGCGATTGCGGAAATTCTGAATTTTGATTTAGTCGATGAACTTCAGCCTTATTTGCAATTAGT
CGGTGATATGGAGCGTATTTTAGCGCGTGTTGCGCTACGTTCAGCGCGTCCACGCGATCTCACCCGCTTACGCACGGCGT
TAGAACAAATTCCTGCATTACGCGCGATTGTGCAACAAAAAACACCGCCATTTTTAACCGCACTTTTCAGCCAAATTGCC
GATTTCAGCGAGCAGTGCGATTTATTGCAACGTGCATTGATTGAAACGCCTCCGCTTTTAATTCGCGATGGTGGTGTGAT
TGCTGAAGGTTACCATACTGAGTTAGACGAATGGCGTATGCTCTCTGATGGTGCAACTCAATATTTGGAAAATCTCGAAA
AACGTGAGCGTGAAAGCACAGGCATTGATACGCTAAAAATCGGTTTTAATGCAGTGCATGGTTATTACATTCAAATTAGC
CAAGGGCAAGCGCATAAAGCGCCTATTCATTATGTACGTCGCCAAACCTTGAAAAATGCAGAGCGTTATATTATTCCCGA
ACTCAAAGAATATGAAGACAAAGTGCTGAAATCAAAAGGCGCAGCGTTAGCATTAGAAAAGCAACTTTACGATGAATTAT
TTGATTTATTATTACCGCACTTAGGCGCGTTGCAACTGGCGAGCCTCGCGCTTTCTGAATTGGATGTATTGGTCAATCTT
GCCGAGCGTGCAGACACCCTCAATTACGTTATGCCAACATTCTGTGATGAAGTGAGCGTGAAAATTGAAAATGGTCGCCA
TCCTGTTGTGGAACAAGTATTGAAAGATCCTTTCATCGCCAACCCAGTGGAACTCAATCACAATCGTCATTTATTAGTTA
TCACTGGGCCAAATATGGGCGGTAAAAGCACTTATATGCGCCAGACCGCATTAATTACATTGCTGGCGTATATCGGCAGT
TTTGTGCCAGCAGACAGCGCGCGAATTGGACCGATTGATCGTATTTTCACTCGAATTGGTGCGTCTGATGATTTAGCCTC
AGGGCGTTCAACCTTTATGGTGGAAATGACTGAAATGGCAAATATTCTTCATCAAGCCACTGCGCAAAGTCTCGTGCTTA
TTGATGAAATCGGACGCGGCACATCCACTTATGATGGCTTATCCTTAGCTTGGGCTTGTGCGGAATGGTTAGCCAAAAAA
ATCCGCTCGCTTACATTATTTGCCACCCATTATTTTGAATTAACCGCATTGCCAGAACAGCTAGAAGGCATCGCGAATAT
TCATTTAGATGCTCTTGAGCATAACAACACCATCGCCTTTATGCACGCCGTACAAGATGGCGCAGCAAGTAAAAGTTATG
GTTTGGCAGTCGCGGCTTTGGCAGGCGTGCCACAATCCGTCATTAAACTAGCAAAACAGAAATTGACACAATTAGAAAAA
AACTCAAGCTATTCAGTCGAAGAGCAAATTCAAGCACTGCGTGAAGCCAATCACAATCAGGGCGAATTATTGTTTGAACA
AGAAACGGATGCACTAAGAGAGGCTATTGAAAAACTGGATCCCGATGATTTAAGCCCTAAACAAGCCTTGGCGTATTTGT
ATCAGTTAAAGAAAATGGTGGGGTAA

Protein sequence :
MISEENFQQHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQSAGQPIPMAGMPYHAVEGYL
AKLVQLGESVAICEQIGDPTTSKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKEKFGLATLDMTSGRFQLCEP
ADKETLRAELQRIAPVELLYCEEFNEMAAIEHCKGLRRRPIWEFELSTAITLLNHQFGTKDLRAFGVEKSPLGLSAAGCL
LQYAKETQRTALPHIQSISLIQNQDCIQLDVATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEK
LKQRQQAIAEILNFDLVDELQPYLQLVGDMERILARVALRSARPRDLTRLRTALEQIPALRAIVQQKTPPFLTALFSQIA
DFSEQCDLLQRALIETPPLLIRDGGVIAEGYHTELDEWRMLSDGATQYLENLEKRERESTGIDTLKIGFNAVHGYYIQIS
QGQAHKAPIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALALEKQLYDELFDLLLPHLGALQLASLALSELDVLVNL
AERADTLNYVMPTFCDEVSVKIENGRHPVVEQVLKDPFIANPVELNHNRHLLVITGPNMGGKSTYMRQTALITLLAYIGS
FVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRGTSTYDGLSLAWACAEWLAKK
IRSLTLFATHYFELTALPEQLEGIANIHLDALEHNNTIAFMHAVQDGAASKSYGLAVAALAGVPQSVIKLAKQKLTQLEK
NSSYSVEEQIQALREANHNQGELLFEQETDALREAIEKLDPDDLSPKQALAYLYQLKKMVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HICON_07880 YP_004137937.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 71