Gene Information

Name : HICON_00580 (HICON_00580)
Accession : YP_004139007.1
Strain : Haemophilus influenzae F3047
Genome accession: NC_014922
Putative virulence/resistance : Resistance
Product : HTH-type transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1750792 - 1751250 bp
Length : 459 bp
Strand : +
Note : -

DNA sequence :
ATGATAAAATATGAAGTAACTTTAGAATCAAGTCATTTTTTAAGGAAATTGATGAAAATTGGAGCGCTTGCTAAAGCCCT
AGGCTGTACCGTAGAAACCATTCGTTATTATGAACAACAAGGTTTAATCCCGCTCCCCAAACGCACTTCAGGCAATTTTA
GGCAATATAATGAAGAACACTTGCAACGTTTATCATTTATTTGTAACTGCCGAAATCTAGATATTTCATTAAGTGAAATA
AAAACCCTACTGAATTTAGAAAACGCCTCCAAACAACAAGCAGAAGAAATAAATCGTGTATTAGACAAACACATTAAAGA
GGTGGCGACAAGGATTCACGAACTCGCCCATTTGCGGATGAAATTAATGGAATTACGTGAGAAAGCAGTCTCGAATGATG
AAGATCCAATGAAATTGCTATTGCAACATAGTGGCGTGAAATTTGTGCGATTAAAATAA

Protein sequence :
MIKYEVTLESSHFLRKLMKIGALAKALGCTVETIRYYEQQGLIPLPKRTSGNFRQYNEEHLQRLSFICNCRNLDISLSEI
KTLLNLENASKQQAEEINRVLDKHIKEVATRIHELAHLRMKLMELREKAVSNDEDPMKLLLQHSGVKFVRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-22 49
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 8e-20 42
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 7e-20 42
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 5e-20 42
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-20 41
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-20 41
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-20 41
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HICON_00580 YP_004139007.1 HTH-type transcriptional regulator BAC0058 Protein 3e-26 46