Gene Information

Name : HICON_13270 (HICON_13270)
Accession : YP_004138470.1
Strain : Haemophilus influenzae F3047
Genome accession: NC_014922
Putative virulence/resistance : Virulence
Product : sialic acid transporter, TRAP-type C4-dicarboxylate transport system, periplasmic component
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1638
EC number : -
Position : 1124965 - 1125954 bp
Length : 990 bp
Strand : -
Note : -

DNA sequence : 
ATGATGAAATTGACAAAACTTTTCCTTGCCACCGCCATTTCTTTAGGCGTATCTTCTGCTGTTCTTGCCGCTGATTATGA
CTTGAAATTCGGTATGAATGCTGGAACTTCATCAAATGAATATAAAGCGGCAGAAATGTTTGCCAAAGAAGTCAAAGAAA
AATCACAGGGTAAAATTGAAATTTCACTTTATCCAAGTTCACAATTAGGTGATGACCGTGCAATGTTAAAACAATTAAAA
GACGGTTCTCTCGACTTTACCTTTGCAGAATCTGCTCGCTTCCAGCTGTTTTACCCTGAAGCGGCAGTATTTGCCTTACC
TTATGTTATTAGCAACTACAATGTTGCACAAAAAGCCTTATTCGATACAGAATTCGGTAAAGATTTAATTAAAAAAATGG
ACAAAGATCTTGGCGTGACTTTACTTTCCCAAGCTTATAACGGAACTCGCCAAACGACTTCAAATCGTGCAATCAACAGT
ATTGCAGATATGAAAGGCTTAAAACTTCGTGTGCCAAATGCAGCAACAAACTTAGCCTATGCTAAATATGTTGGCGCATC
ACCAACACCAATGGCATTTTCTGAAGTTTATCTTGCGTTACAAACCAATGCCGTCGATGGTCAAGAAAACCCGTTAGCAG
CGGTGCAAGCACAAAAATTCTATGAAGTGCAAAAGTTCTTAGCTATGACTAATCACATTTTGAATGACCAACTTTATTTA
GTAAGCAACGAGACTTATAAAGAACTCCCTGAAGATCTTCAAAAAGTCGTAAAAGATGCTGCCGAAAATGCAGCAAAATA
TCACACTAAATTATTCGTAGATGGAGAGAAAGATTTAGTCTCATTCTTTGAAAAACAAGGCGTGAAAATTACACATCCTG
ATCTTGTCCCATTTAAAGAATCAATGAAGCCGTATTATGCTGAGTTTGTAAAACAAACTGGTCAAAAAGGTGAATCAGCT
TTAAAACAAATTGAAGCAATCAATCCATAA

Protein sequence : 
MMKLTKLFLATAISLGVSSAVLAADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLK
DGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINS
IADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYL
VSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVSFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESA
LKQIEAINP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 7e-70 50
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 7e-70 50
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 2e-70 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HICON_13270 YP_004138470.1 sialic acid transporter, TRAP-type C4-dicarboxylate transport system, periplasmic component VFG1112 Protein 3e-70 50