|
Name : HICON_03820 (HICON_03820) Accession : YP_004137536.1 Strain : Haemophilus influenzae F3047 Genome accession: NC_014922 Putative virulence/resistance : Virulence Product : restriction endonuclease, type I, R subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 114344 - 117364 bp Length : 3021 bp Strand : + Note : - DNA sequence : ATGGTTTCAGGAACTAAGGAAAAAGATTTAGAAATTGCCATCGAAAAAGCCTTAACTGGCACTTGGCGTGAAAACATGGA AAATAAGCTGGGCGAGCCGAAGGCGGAATACCTGCCGCGCCATCATGGTTTTGAGCTGGCATTTTCACAGGATTTTGATG CGCAGTTTGCCATTGACACGCGCCTGTCTTGGCAATTCCTGCAAACCAGCCAAGAGGCAGAATTAGGTCGTTTTCAACAG CTCAATCCCAACGATTGGCAACGTAAAATTCTAGAACGGTTAGACCGACAAATAAAGAAAAACGGCGTGTTGCACCTGCT GAAAAAAGGCTTGGACATTGATAGCGCCCATTTTGATTTGCTCTACCCCGTTCCGCTTGCCAGCAGTGGCGAAAAGGTCA AGCAGCGTTTTGAACAGAATCTGTTTAGCTGTATGCGACAAGTGCCTTATTCCGCATCAAGCAATGAAACGGTGGATATG GTGCTGTTTGTCAATGGCTTGCCGATTATTACCCTTGAGCTGAAAAACCATTGGACGGGTCAGACGGCCATTGATGCCCA AAAACAATATCGCAACCGAGATTTAAGCCAAACGTTGTTCCATTTCGGGCGTTGTTTGGCGCATTTTGCCTTAGATACGG AAGAAGCTTATATGACCACCAAATTGGCGGGGCCTGCTACGTTTTTCTTGCCGTTTAACTTGGGCAACAACTGCGGTAAG GGTAATCCGCCCAATCCCAATGGACACCGCACGGCGTATTTATGGCAAGAGGTGTTCGGCAAAGCAAGCCTTGCCAACAT TATTCAGCATTTTATGCGTTTAGATGGGTCAACCAAAGATCCTTTGGATAAACGCACACTCTTTTTCCCTCGCTATCATC AATTAGAGGTGGTGCGCCATTTGATTGCTGATGTCAGTGAACAAGGCGTGGGCAAACGCTATTTGATTCAACACTCTGCT GGCTCGGGTAAATCTAATTCTATTACTTGGTTGGCGTATCAGTTGATTGAGGCTTATCCGCGCAATAAACAGGCGGCAAA CGGCAGGGAGGCAGACCGCCCGATTTTTGATTCGGTCATTGTCGTTACCGACCGCCGTTTGTTGGATAAGCAACTGCGCG ACAATATCAAAGATTTTTCAGAAGTTAAAAATATTGTTGCGCCGGCGTTGAGTTCGGCGGAATTGCGCCAATCCCTTGAG CAGGGCAAAAAAATCATTATTACCACGATTCAAAAATTCCCGTTTATTGTCGATGGCATTGCTGATTTAGGCGACAAACA ATTTGCGGTGATTATTGATGAGGCACACAGCTCACAATCAGGTTCGGCACACGACAATATGAACCGAGCCATCGGCAAAA CGGAAGACCTTGATGCTGAAGATGTGCAAGATTTGATTTTACAAACCATACAATCCCGCAAAATGCACGGCAATGCGTCG TATTTTGCTTTCACCGCCACACCGAAAAACAGCACTTTGGAAAAATTCGGCGAAAAACAGGCGGATGGCAAGTTTAAGCC GTTCCACCTTTATTCTATGAAGCAGGCAATTGAAGAAGGCTTTATTTTGGATGTAATCGCCAATTACACCACCTATAAAA GTTTTTATGAGATCACTAAATCGATTGAAGATAATCCGGAGTTTGACAGTAAAAAGGCTCAAAGCCGTCTGAAAGCTTAT GTGGAGCGTTCGCAACAAACGATTGATACCAAGGCGGAAATTATGCTGGATCATTTTATCCGGCAAATCTTTAACCGTAA AAAACTCAAAGGCAAAGCCAAGGGAATGGTGGTAACGCAAAATATTGAAACCGCCATCCGCTATTTTCAGGCGTTAAAAC ACTTGCTGGCCGGGCGGGGTAATCCGTTTAAAATTGCGATTGCGTTTTCAGGCAGTAAAGTGGTTGACGGTGTCGAATAC ACCGAAGCGGAAATGAACGGCTTTGCAGAAAGCGAAACCAAAGAGTATTTCGATCAAGATGAATATCGTTTGCTGGTGGT CGCCAATAAATATCTGACCGGTTTCGATCAGCCGAAATTGTGTGCCATGTATGTGGATAAGAAACTCTCCGGCGTGCTTT GCGTGCAGGCTTTATCTCGTTTGAATCGCAGTGCGAATAAGTTGAGTAAACGCACGGAAGATTTGTTTGTATTGGACTTT TTTAACAGCGTTGAAGATATTCAGCAGGCATTTAAGCCGTTTTATACTTCTACTTCGTTGTCGCAGGCAACCGATGTCAA TGTCTTGCATGATTTGAAAGACCGGTTGGATGAAACCGGCGTGTACGAACAAGCGGAGGTCAACGATTTTACTGAAGGCT ATTTTGCCAATAAAGACGCACAGCAATTAAGCAGTATGATTGATGTGGCTGTCCAACGTTTTGATGATGAATTGGATTTG GATCGAAATGAAAAAGTTGATTTTAAAATCAAGGCAAAACAGTTTTTAAAAATCTACGGGCAAACGGCCTCCATCATCAA TTTTGAAAATATCGCTTGGGAAAAGCTCTATTGGTTCCTCAAATTCTTAGTGCCGAAATTAAAAGTACAAGACCCGATGG ATGAATTTGATGAAATTTTAGATGCTGTGGATTTAAGCTCTTACGGCTTGGCGCGTACCAAACTGAATTACAGCATTAAA TTAGATGATGAAGAAACAGGGCTTGACCCGCAAAACCCCAATCCGCGCGGTACGCATGGCGAAGATAAAGAAAAAGATCC GATTGATGAAATTATTCGTGTATTTAACGAAAGATGGTTTCAAGGCTGGAGCGCAATGCCGGATGAGCAACGGGTAAAAT TTATCAATATTACCGAGCGCATCCGCAACCATAAAGACTTTGAGCAAAAATATCAAAATAACCCGGATATTCATACCCGT GAATTGGCTTTCCAAGCCATTTTGCGCGATGTGATGAGCGAACGCCATCGGGATGAATTGGAACTATACAAACTTTTTGC CAAAGATGCCGCATTTAGAACCGCTTGGACGCAAAGTTTGCAACGGGCTTTGGCTGGATAG Protein sequence : MVSGTKEKDLEIAIEKALTGTWRENMENKLGEPKAEYLPRHHGFELAFSQDFDAQFAIDTRLSWQFLQTSQEAELGRFQQ LNPNDWQRKILERLDRQIKKNGVLHLLKKGLDIDSAHFDLLYPVPLASSGEKVKQRFEQNLFSCMRQVPYSASSNETVDM VLFVNGLPIITLELKNHWTGQTAIDAQKQYRNRDLSQTLFHFGRCLAHFALDTEEAYMTTKLAGPATFFLPFNLGNNCGK GNPPNPNGHRTAYLWQEVFGKASLANIIQHFMRLDGSTKDPLDKRTLFFPRYHQLEVVRHLIADVSEQGVGKRYLIQHSA GSGKSNSITWLAYQLIEAYPRNKQAANGREADRPIFDSVIVVTDRRLLDKQLRDNIKDFSEVKNIVAPALSSAELRQSLE QGKKIIITTIQKFPFIVDGIADLGDKQFAVIIDEAHSSQSGSAHDNMNRAIGKTEDLDAEDVQDLILQTIQSRKMHGNAS YFAFTATPKNSTLEKFGEKQADGKFKPFHLYSMKQAIEEGFILDVIANYTTYKSFYEITKSIEDNPEFDSKKAQSRLKAY VERSQQTIDTKAEIMLDHFIRQIFNRKKLKGKAKGMVVTQNIETAIRYFQALKHLLAGRGNPFKIAIAFSGSKVVDGVEY TEAEMNGFAESETKEYFDQDEYRLLVVANKYLTGFDQPKLCAMYVDKKLSGVLCVQALSRLNRSANKLSKRTEDLFVLDF FNSVEDIQQAFKPFYTSTSLSQATDVNVLHDLKDRLDETGVYEQAEVNDFTEGYFANKDAQQLSSMIDVAVQRFDDELDL DRNEKVDFKIKAKQFLKIYGQTASIINFENIAWEKLYWFLKFLVPKLKVQDPMDEFDEILDAVDLSSYGLARTKLNYSIK LDDEETGLDPQNPNPRGTHGEDKEKDPIDEIIRVFNERWFQGWSAMPDEQRVKFINITERIRNHKDFEQKYQNNPDIHTR ELAFQAILRDVMSERHRDELELYKLFAKDAAFRTAWTQSLQRALAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HICON_03820 | YP_004137536.1 | restriction endonuclease, type I, R subunit | VFG1098 | Protein | 0.0 | 68 |
