Gene Information

Name : HICON_03790 (HICON_03790)
Accession : YP_004137533.1
Strain : Haemophilus influenzae F3047
Genome accession: NC_014922
Putative virulence/resistance : Virulence
Product : type I restriction-modification system, methyltransferase subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 108847 - 111219 bp
Length : 2373 bp
Strand : +
Note : -

DNA sequence :
ATGGATCATTCTGTTCATAACAAGCTGGTTTCTTTTATTTGGAGTATTGCAGACGATTGTCTGCGCGATGTGTATGTGCG
CGGTAAATATCGTGATGTGATTTTACCGATGTTTGTGCTTCGTCGTTTGGATACTTTACTTGAGCCAAGCAAAGATGCCG
TATTGGAAGAAATGCGTTTTCAAAAAGAAGAATTGGCATTCACCGAATTGGATGACCTTCCCCTTAAAAAAATTACCGGT
CATGTTTTTTATAACACCTCAAAATGGACATTAAAATCCCTCTATCAAACCGCCAGCAATACGCCGCAGTATATGCTGGC
CAATTTTGAAGAATATCTTGATGGTTTCAGCACCAACGTTCATGAAATCATCAACTGCTTCAAGCTGCGTGAACAAATCC
GCCACATGTCCCATAAAAATGTTTTGCTGAGTGTGTTGGAAAAATTTGTATCGCCCTATATCAATCTTACCCCTAAAGAA
CAACAAGACACTGAGGGCAACAAATTACCAGCGCTGACCAATCTGGGCATGGGCTATGTATTTGAAGAACTGATTCGTAA
ATTTAACGAAGAAAATAACGAAGAAGCTGGCGAACACTTTACCCCACGCGAAGTGATCGAGCTGATGACGCATTTAGTCT
TTGATCCGCTCAAAGACCAAATTCCGGCCATTATTACGATTTACGACCCAGCTTGCGGCAGCGGTGGCATGCTGACCGAG
TCGCAAAACTTTATTGAGCAAAAATATCCGCTATCTGAATCACAAGGCGAGCGTTCCATCTTTTTGTTTGGTAAAGAAAC
CAATGATGAAACCTATGCCATTTGTAAATCTGACATGATGATTAAAGGCGACAACCCTGAAAACATCAAAGTCGGCTCAA
CCCTTGCTACAGATAGCTTCCAAGGTAATCACTTTGACTTTATGCTTTCCAACCCGCCATATGGCAAAAGCTGGAGCAAA
GATCAAGCCTATATCAAAGACGGCAATGAGGTTATCGACAGTCGCTTTAAAGTTACCTTACCAGATTACTGGGGCAATGT
AGAAACCCTTGATGCCACCCCGCGCTCCAGCGATGGTCAGCTGCTTTTCCTGATGGAAATGGTCAACAAAATGAAATCGC
CGAAAAACAACAAAATCGGCAGCCGTGTTGCCTCTGTGCATAACGGCTCAAGCCTGTTTACCGGCGATGCAGGTTCAGGA
GAAAGCAACATCCGTCGCCATATCATTGAGAATGATTTGCTGGAAGCCATCGTACAGCTGCCTAATAATCTGTTTTATAA
CACAGGCATTACCACTTATATTTGGTTGCTGTCCAACAACAAACCCGAAGCACGCAAAGGCAAAGTTCAGCTGATTGATG
CCAGCCTCTTATTCCGCAAATTGCGTAAAAACCTTGGCGATAAAAACTGCGAATTTGTACCTGAACATATCTCCGAAATT
ACCCAAAACTATCTTGATTTCACTGCCAAAGCGCGCGAAACCGACAGCCAAAATGAAGCGGTCGGTTTGGCTTCGCAGAT
TTTTGACAATCAAGATTTCGGCTATTACAAAGTCACCATCGAACGCCCGGATCGTCGTTCTGCCCAATTTACCGTCGAAA
ATATTGCGTCTTTACGTTTTGACAAAGCCTTGTTTGAGCCGATGCAATATCTTTATCGGCAATATGGCGGACAAGTTTAC
AACGCCGGATTTTTAACCCAAACCGAGCAAGAAATTACCGCTTGGTGCGAAGCGCAGGGCATAGCCTTAAACAACAAAAA
CAAGGCAAAGCTACTGGATGTCAAAACCTGGGAAAAAGCCGCCGCACTTTTTCAGACGGCATCAAAACTGCTCGAACATT
TCGGCGAACAACAATTTGACGATTTCAACCAATTCAAACAAGCCGTGGAATGCCGTCTGAAAACCGAAAAAATCCCCCTT
TCTGCCACAGAGAAAAAGGCCATTTTCAATGCCGTAAGTTGGTACGACGAAAATTCAGCCAAAGTGATTGCCAAAACACT
CAAGCTCAAACCAAACGAATTGGACGCCCTTTGCCAACGCTACCAATGCCAAGCCGACGGGCTGGCAGACTTTGGCTATT
ACACCACTGGCAAAGCAGGCGAATATATCCTATATGAAACCAGCAGCGACTTGCGCGACAGCGAATCCATACCGCTCAAA
CAAAATATCCACGACTATTTCAAAGCCGAAGTGCAAGCGCACATCAGCGAAGCATGGCTGAATATGGAAAGCGTAAAAAT
CGGCTATGAAATCAGCTTCAACAAATACTTCTACCGCCACAAACCATTACGCAGCCTTGCAGAAGTTGCCCAAGATATTT
TGGCGTTAGAAAAACAGGCTGACGGCTTGATTAGTGAAATTCTAGAGGCTTAA

Protein sequence :
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRFQKEELAFTELDDLPLKKITG
HVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNVHEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKE
QQDTEGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE
SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSFQGNHFDFMLSNPPYGKSWSK
DQAYIKDGNEVIDSRFKVTLPDYWGNVETLDATPRSSDGQLLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSG
ESNIRRHIIENDLLEAIVQLPNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFVPEHISEI
TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTVENIASLRFDKALFEPMQYLYRQYGGQVY
NAGFLTQTEQEITAWCEAQGIALNNKNKAKLLDVKTWEKAAALFQTASKLLEHFGEQQFDDFNQFKQAVECRLKTEKIPL
SATEKKAIFNAVSWYDENSAKVIAKTLKLKPNELDALCQRYQCQADGLADFGYYTTGKAGEYILYETSSDLRDSESIPLK
QNIHDYFKAEVQAHISEAWLNMESVKIGYEISFNKYFYRHKPLRSLAEVAQDILALEKQADGLISEILEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HICON_03790 YP_004137533.1 type I restriction-modification system, methyltransferase subunit VFG1102 Protein 0.0 71