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Name : clpB (MfeM64YM_1028) Accession : YP_004137400.1 Strain : Mycoplasma fermentans M64 Genome accession: NC_014921 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease, atpase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1069563 - 1071716 bp Length : 2154 bp Strand : + Note : Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03695 DNA sequence : ATGGATTTTAATTTAGATGACTTATTTGGTTCTAATGACAATAAAAGTAAAAAATCAAGTGATCCATTAAAAATTTATGG AAGAAACTTAACTGATTTAGCTGCTCGGAATGAATTAGATCCTGTTATTAATCGTGATGATGAAATCAGAAGAATGATTC GCATTTTGAGTAGGAAAACAAAAAACAACCCAGTATTAGTCGGCGAACCAGGTGTTGGTAAAACAGCTATTGTTGAAGGA TTGGCTAGAAAAATAGTTGAGGGTCAAGTACCAGAAAACTTAAAAGGTAAAGATATTTTTGAACTTGACTTAGCTGCTTT AATAGCTGGCGCTTCATATCAAGGACAATTTGAAAAGAGATTAAAAGACGTACTCAAAAGAATTGAAGAATCTAATGGTG ACATTATAGTTTTCATTGATGAAATTCACATGCTTATTGGCACAGGTCGAAATGCTGAAGGTGGTATGGATGCTGCTAAC ATCATTAAACCTTTAATGGCCAGAGGTAAAATGCATTTAATTGGTGCTACAACTTTTGATGAATATAGAAAATATATAGA AAAAGATGCGGCTCTTGAAAGAAGAATGCAAAGAGTGGATGTATTAGAGCCTTCAATTGAAGATACTATTACAATTCTTC GTGGTATCAAAGACCGTTTTGAAAATTACCACAATGTAAAAATTCAAGATGATGCTTTAGTAGCTGCTGCTCGTCTTTCT TCAAGATATATTTCTGATAGATTTTTACCAGATAAAGCTATTGACTTAGTTGATGAAGCTGCTGCAACTATTAAAACAGA AATAAACTTTCAACCTGAAGAATTAGAAAAAGCTAAACAAAAAATGGCTAGATTGAAAATGGAAAAAATAGCCATTTCTA GTGAAGACAAGAAAAAACATGCAGTTAGACTTAAAGAAATTGATGCCGAAATAAAAGATATTGAAAAAACAATAAAACAA TTAGAAGATAAATGAAATTTTGAAAAACAAAGACTTGAAGAATTGTCTAATTTAAAAAGTAAATTAGATGACGCAAGACA TAGATTAAATATTTACCAAAAAGAAACAGATTATGAAAAAGCTTCAAAAATTTTGTATGATGAAATTCCAAGCATTAAGA AACAAATCGAAGAAACAGAAAAAGAAATAGCAGAATCAGGTAACACAATTGTTAAAGATAGTGTTACAAGTGAAGAAATT GCTAACATTGTTTCGAAATGAACTAAAATTCCAATTTCAAAATTACTTGAAAGTGATAAAGAAAAATTGTTAAATCTTGA AAACGATTTAAAGAAAAGAATAAAAGGGCAAGATGCTGCCATTAGATTAGTTGCTCAAGCTGTATTAAGAGCTAAAGCAA ATATTAATGATCCTAATAGGCCTTTAGCAAGTTTCTTATTTACAGGACCTACTGGTGTTGGTAAAACAGAATTAGCAAGA GCTCTTGCATATTCTCTTTTTGATAGTGAAAAACAAATGATTCGTTTAGACATGTCTGAATACATGGAAAAACATAGTGT TTCTAAAATCATTGGTGCTCCTCCAGGATATGTTGGATATGACAGCGGTGGATCATTAACTGAAAAAATTAGAAAGAATC CTTACACAATTCTTTTATTCGATGAAATCGAAAAAGCTGACCGCGATGTTCTTAACATTCTTTTACAAATGATGGATAAT GGGGCTATTACAGACTCAAAAGGCCGTGTAATTAACTGTCGTAATTTAATTATAATTATGACAAGTAATTTAGGCTCACA AGAAATACTTAAACATTTAGATCAAATGCCAAGTATTAAAGCTGAATTGCTTAAATTCTTGAGTCCTGAATTTGTAAACA GAATTGATGAAATTGTCAAATTTAATCCATTAACTAAAGATGTAATTAATGAAATTGTTGAACTTGAACTTCAAAAATTA GCTACTAGAATGAAAGATGTTAAAGATGTAAAAATATCATTCACAAGCAAAACTGTTGACTTTGTAGGTTCTTCTTCATA TGATGAAAACTTTGGGGCAAGGCCTATTAAAAGATTTATCCAAAATAAAATTGAAAGCTTATTAGCTTACAAGATTATTG ATGGCACCATAAGAAGCGGAAAAGCCTATAAAATAGACGTTTTCGCCGGAAACTTTGTTGTTAAAGAAGCCTAA Protein sequence : MDFNLDDLFGSNDNKSKKSSDPLKIYGRNLTDLAARNELDPVINRDDEIRRMIRILSRKTKNNPVLVGEPGVGKTAIVEG LARKIVEGQVPENLKGKDIFELDLAALIAGASYQGQFEKRLKDVLKRIEESNGDIIVFIDEIHMLIGTGRNAEGGMDAAN IIKPLMARGKMHLIGATTFDEYRKYIEKDAALERRMQRVDVLEPSIEDTITILRGIKDRFENYHNVKIQDDALVAAARLS SRYISDRFLPDKAIDLVDEAAATIKTEINFQPEELEKAKQKMARLKMEKIAISSEDKKKHAVRLKEIDAEIKDIEKTIKQ LEDKWNFEKQRLEELSNLKSKLDDARHRLNIYQKETDYEKASKILYDEIPSIKKQIEETEKEIAESGNTIVKDSVTSEEI ANIVSKWTKIPISKLLESDKEKLLNLENDLKKRIKGQDAAIRLVAQAVLRAKANINDPNRPLASFLFTGPTGVGKTELAR ALAYSLFDSEKQMIRLDMSEYMEKHSVSKIIGAPPGYVGYDSGGSLTEKIRKNPYTILLFDEIEKADRDVLNILLQMMDN GAITDSKGRVINCRNLIIIMTSNLGSQEILKHLDQMPSIKAELLKFLSPEFVNRIDEIVKFNPLTKDVINEIVELELQKL ATRMKDVKDVKISFTSKTVDFVGSSSYDENFGARPIKRFIQNKIESLLAYKIIDGTIRSGKAYKIDVFAGNFVVKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-130 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004137400.1 | ATP-dependent clp protease, atpase subunit | VFG2084 | Protein | 3e-98 | 41 |
