Gene Information

Name : HIBPF10530 (HIBPF10530)
Accession : YP_004135519.1
Strain : Haemophilus influenzae F3031
Genome accession: NC_014920
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1000333 - 1001841 bp
Length : 1509 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGAACAAGAAGTTAAAGAATTAGATCTCAATGGCGAAATGCTCGTTCGTCGTGAAAAATTATCCGCATTACGTGC
AAAAGGTAATGCATTTCCAAACAAGTTTCGTCGTGATACTCTCGCACAAGATTTACACAATCAATATGATTCAGAAGACG
GGGAAATCTTAAAAGAAAAAGGCATTGAAGTACAAGTTGCTGGTCGTATTATGACTCGTCGTGCAATGGGTAAAGCAACG
TTTATCACTATTCAAGATATGAGCGGTAAAATCCAGCTTTACGTTGCACGCGATAATTTGCCTGAAGGTGTTTATGCTGA
AGATGTAGGTAACTGGGATTTAGGCGATATCATTGGAGTGAAAGGTACACTTTTCAAAACTAAAACCAATGAATTAACCA
TCAAAACAACTGAAGTTCAACTTTTAACCAAAGCACTTCGTCCATTACCAGACAAATTCCATGGCTTAACCGACCAAGAA
GTTCGTTATCGCCAACGTTATTTAGATTTAATTTCTAACGAAGAATCTCGCCGCACTTTTATTATTCGTTCTAAAGTTGT
CGCGGGTATTCGTGAATATTTCATTTCTAAAGGCTTTATGGAAGTGGAAACGCCAATGTTACAAGTCATTCCAGGCGGTG
CATCTGCACGTCCTTTCGTGACTCATCACAATGCATTAGATGTGGATATGTATTTACGTATCGCACCTGAACTTTATTTA
AAACGCTTGGTCGTTGGTGGATTTGAACGAGTATTTGAATTAAACCGCAACTTCCGTAATGAAGGGGTTTCTGTTCGTCA
TAATCCAGAATTTACCATGCTTGAATATTATCAAGCCTATGCAGATTACCACGATTTAATGGATAACACAGAAGAACTGC
TTCGTAAATTAGCGATTGATATTCTTGGTACTACCATTGTGAAATACGGCGAATACGAATTTGATTTTGGTAAACCATTC
GAACGTATTACGTTACACGATGCAACCATTAAATATGGTGCAGACAAAGGTATCGTAAAAGAAGATTTATATGACTTTGA
TCGTGCAAAAGCTACGGCTGAACGCTTAGGTATTGAAGTACAAAAATCTTGGGGCTTAGGCAGCATTGTCAATGCAATCT
TTGAAGAAGTGGCTGAACATCACTTAATTCAACCAACATTCTTAATGGCTCATCCTGCGGAAATTTCGCCACTTGCACGT
CGTAATGATGAAAATCCTGATGTAACAGATCGTTTTGAGCTATTTATCGGTGGTCGTGAAATCGGTAATGGTTTCTCAGA
ATTAAATGACGCGGAAGATCAAAATGAACGTTTTGATGCACAAGTGACTGCGAAAGAAGCGGGCGATGATGAAGCGATGT
TTAAAGATGAAGACTTTGTTGTTGCACTAGAACACGGCTTACCACCAACAGCTGGGGAAGGTTTAGGTATCGACCGTCTA
GCGATGCTTTATGCAAATGCGCCATCCATTCGTGATGTGATCTTATTCCCTGCAATGCGTCAGAAATAA

Protein sequence :
MSEQEVKELDLNGEMLVRREKLSALRAKGNAFPNKFRRDTLAQDLHNQYDSEDGEILKEKGIEVQVAGRIMTRRAMGKAT
FITIQDMSGKIQLYVARDNLPEGVYAEDVGNWDLGDIIGVKGTLFKTKTNELTIKTTEVQLLTKALRPLPDKFHGLTDQE
VRYRQRYLDLISNEESRRTFIIRSKVVAGIREYFISKGFMEVETPMLQVIPGGASARPFVTHHNALDVDMYLRIAPELYL
KRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLAIDILGTTIVKYGEYEFDFGKPF
ERITLHDATIKYGADKGIVKEDLYDFDRAKATAERLGIEVQKSWGLGSIVNAIFEEVAEHHLIQPTFLMAHPAEISPLAR
RNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVTAKEAGDDEAMFKDEDFVVALEHGLPPTAGEGLGIDRL
AMLYANAPSIRDVILFPAMRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-152 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HIBPF10530 YP_004135519.1 lysyl-tRNA synthetase VFG1668 Protein 1e-152 64