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Name : hsdM3 (HIBPF06860) Accession : YP_004135183.1 Strain : Haemophilus influenzae F3031 Genome accession: NC_014920 Putative virulence/resistance : Unknown Product : type i restriction enzyme hindviip m protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 638830 - 640590 bp Length : 1761 bp Strand : - Note : - DNA sequence : TTGAATATTCAAACTTCCGATAAAAATCACTTTACAGAGGGCATAATTTATGCAAGCGAGACGAGACGAGACGAGACGAG ACGAGACGAGACGAGACGAGACGAGACGACCAAGATTGTCGATAAAAATCACACATTACAACAAGCATTTTTAAATGAAT TAGATGAAAAACTTTGGGCATCTGCTGATAAACTCCGCCAACAACTTGATGCCGCTAACTATAAACATATCGTTCTTGGT CTTATCTTTTTAAAATACATTTCTGATAGTTTCACCCATCAACAGGAAAAAATTCAGGCGGAACTGACCGATCCTGAAAA TGTGCTCTATCTTGACCGCACTTTTTACGACACCGAAGAAAAATATCAAGATGCCTTAACCGCAGAACTAGAAAACCGTG ATTATTACACCGCGGATAACGTATTTTGGGTGCCAGCTTCTGCACGTTGGCAAGCCTTACAAGAAGTCTCTATTCTCAAC ACTGGGGCAGAATTGCCTTGGGGTGGAAAATTTTCTGGTGTGGCAAAACTGATTGACGATGCCTTCGATGCCATTGAAAA AGACAACGAAAAACTGAAAGGCGTACTCCAACGCATCAGCGGCTATGCCGTAAACGAAGACACCTTGCGCGGGCTGATTA TCCTTTTCTCCGATACCCACTTTACCCGCCCAACTTACAACGGCGAGCCCGTACATTTAGGCGCAAAAGATATTCTCGGC CACGTTTACGAATACTTCCTCGGTCGCTTTGCCCAAGCCGAAGGCAAACGCGGCGGACAATATTTTACGCCGAAATCCAT CGTTTCCCTGATTGTCGAAATGCTCGAACCCTATTCAGGACGCGTGTATGACCCAGCCATGGGCAGCGGCGGCTTTTTCG TGCAAACCGAACGCTTTATCACCGCCCATCAAGGCAACATCAACAACATGTCCATCTACGGGCAAGAATTCAACCCCACC ACTTGGAAACTCGCCGCCATGAACATGGCGATTCGTGGCATTGATTACGACTTCGGCAAACACAATGCCGACAGTTTTAC CCAGCCGCAACACATCGACAAAAAGATGGATTTCATTATGGCAAACCCGCCATTCAATATCAGCGATTGGTGGAGCGAAT CCCTTGCCGATGACCCACGTTGGGCATACGGCACGCCGCCTAAAGGCAACGCCAACTTCGCTTGGCTGCAACACATGATT TACCACCTCTCGCCCAACGGCAAAATGGCATTATTGCTTGCCAACGGCTCTATGAGCAGCCAAACCAACAACGAAGGCGA AATCCACAAAGGCATCATCAATGCCGACTTGGTGGAATGTATGGTTGCCCTACCAGGTCAGCTCTTCACCAACACCCAAA TCCCCGCCTGTATTTGGTTTTTAAACCGCAACAAAAAGCGCAAAGGCGAAGTATTGTTTATTGATGCCCGCCAAATCGGC TATATGAAAGACCGCGTATTGCGTGATTTCACCGCTGACGACATCGCCAAAATTTCCGACACCCTCCACGCTTGGCAAAA ATCAGACGGCTATGAAGACCAAGCCGCTTTCTGCAAATCCGCGACTTTAGAAGAGATTAAAGACAACGATTTCGTCCTCA CACCAGGGCGCTACGTCGGCACTGCAGAACAAGAAGATGACGGCGTGCCATTTGCAGAAAAAATGCAAAATCTGACCGCT CTTTTAAAGGAACAATTTGCGAAAAGTGCGGAATTGGAAGCGGAAATTAAGAAGAATTTAGGGGGATTGGGGTATGAATA A Protein sequence : MNIQTSDKNHFTEGIIYASETRRDETRRDETRRDETTKIVDKNHTLQQAFLNELDEKLWASADKLRQQLDAANYKHIVLG LIFLKYISDSFTHQQEKIQAELTDPENVLYLDRTFYDTEEKYQDALTAELENRDYYTADNVFWVPASARWQALQEVSILN TGAELPWGGKFSGVAKLIDDAFDAIEKDNEKLKGVLQRISGYAVNEDTLRGLIILFSDTHFTRPTYNGEPVHLGAKDILG HVYEYFLGRFAQAEGKRGGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNMSIYGQEFNPT TWKLAAMNMAIRGIDYDFGKHNADSFTQPQHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANFAWLQHMI YHLSPNGKMALLLANGSMSSQTNNEGEIHKGIINADLVECMVALPGQLFTNTQIPACIWFLNRNKKRKGEVLFIDARQIG YMKDRVLRDFTADDIAKISDTLHAWQKSDGYEDQAAFCKSATLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTA LLKEQFAKSAELEAEIKKNLGGLGYE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-176 | 63 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-126 | 50 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-127 | 50 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-124 | 49 |
