|
Name : Mesci_6390 (Mesci_6390) Accession : YP_004134540.1 Strain : Genome accession: NC_014918 Putative virulence/resistance : Unknown Product : type VI secretion atpase, clpv1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 338005 - 340770 bp Length : 2766 bp Strand : + Note : TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: mlo:mll2335 ClpA/B-type protease; SMART: AAA ATPase DNA sequence : ATGGAACAGCGCCGGTCGTCGCAGAGCTTCAAGCGTAAGGAACTGGTCGGCAAGCTTGATCCTGTCGGGGTGCGCGCCTT CAAGGCCGCGGCCGATAGCGCCAAGCTGCGCGGCAATCCTTACGTCGAACTCGTTCACTTCATCGAGCAGCTGGTGCTTT CCGACCGCTCCGATGTGCAAATGATAATCGCCGATGCGGGACTGGATGCCAGCCGGCTCACGGCAGATATGACCCGTGCC GTCGACAAGTTGCCCTATGGCGCAACCTCGATCGAGGAATTCTCCGATCATATCTTCCATGCAATCCAGGAAGCCTGGAA CCTCGCGACGCTGGAGTTCGGCGTCGAGGAAGTCCGCAGCGCCCATATTCTGCTTTCCTGCCTGAAAACCCCGGTTCTGG AAGGCCTGCTGTCGAAGATCAGCGGCGAGTTCGACAAGATCGACGCCGATGCGGTTGTCGCGCGGTTCGCCGATGTCGTG GAAGGTTCGCTCGAAGGCGGCGCAGCCATCGCGGTTCCCGCGGCTGAAACGCCGAAGCGGACCATGGGCGGAGATTCGGC CTTGGCGAAATTCGCCACCGATCTGACCCAACGCGCCCGCGAGGGCAAGATCGATCCGGTCGTCGGCCGCGATCCGGAGA TCCGGCAGATAGTCGACATCCTGATGCGGCGTCGGCAAAACAACCCGATCCTGACCGGCGAGGCCGGGGTCGGCAAGACG GCGGTCGTTGAGGGCTTTGCCTTGCGTATCGCTCAGGGCGATGTGCCGCCCACGCTGCAAGGCGTCAGCGTGCGCATGCT CGATGTCGGATTGATGCAGGCGGGCGCCAGCGTGAAGGGCGAATTCGAAAAACGGCTGAAGGCTGTGATCGACGAGGTTC AATCGTCCGAAACGCCGGTCATCCTGTTCATCGACGAGGCCCACACCTTGATTGGCGCCGGCGGTGCTGCCGGAACCGGT GATGCCGCCAATCTCTTGAAGCCGGCGCTGGCACGGGGCGAACTTCGCACCATCGCCGCAACGACCTGGGCCGAATATAA GCAGCACATCGAGAAAGACCCGGCGCTGACCCGCCGTTTCCAGGTGGTCAAGATCGACGAGCCGTCGGAGGCGGTGGCCG TTCTGATGTTGCGCGGGGTGGCAGGGGTTCTGGAGCAACACCACAAGGTGCAGATACTCGACGAGGCGATCGAGGCAGCA GTCGGCCTGTCGCATCGCTACATCCCGGCACGGCAACTGCCTGACAAGGCGGTGAGCCTCCTCGACACCGCCTGCGCCCG TGTCGCCATATCGCAGCATGCTACGCCAGCCGAGGTCGAGGACATCATGCGCCGCCGCCAGGCTCTGGAGGTCGAGCGCG GCATCATCGGGCGCGAGGCCGCGATCGGCATCGAGGTGGCTGAACGGCAGGCGCGCGTCGACACCGGGCTTGCCGAAAGC GAGATCACCCTGGCTGCGGCGCAGCAGCGTTGGGATCGTGAAAAGGTGCTCGTCGCCGAGATACTCGAACTGCGCGCCAG GCTGCGCGGCGAGGGTGTGGCGCTCGATGCGGCCACCGTTGGGGCCGATGCCGAACCGGCAGCGGCGAACGCAGAAAAGA CCAAGGTAGCGGAGTCGTCAGAGACTGAGCCGCCCAAGGCCGCCCAGACGGACGCGGAGACACAGGCCGCTGCCGATCCT GCCGCCGATCTCGCCCGATTGCGCGCACTGATGGCCGAATTGGCAGCGGCACAAGGCGAGACACCGCTGATTCTGCCCTC GGTTGACCGCAATGCAGTGGCCGCCGTGGTCCAGGACTGGACCGGGATCCCGACCGGACGGATGCTGTCCAGCCAGACCG AAAAAGCGCTCAAGCTCGCCGCCACGCTTTCGGAACGGGTTGTGGGGCAGGATCACGCCATGGAGATGATCGCCAAACGC GTGCAGACCAGCCGCGCCGGGCTTGGCGCGCCTGAAAAGCCGGTCGGGGTCTTCCTGCTTTGCGGCCCCTCGGGCGTCGG CAAGACCGAAACGGCATTGGCGCTGGCCGAAACGCTTTACGGTGGCGAGCAGAACCTGATCTCCATCAACATGTCCGAGT TCCAGGAGGCGCACACCGTCTCGACACTGAAGGGCGCACCGCCCGGCTATGTCGGCTACGGCAAGGGCGGCATCCTGACC GAAGCGGTGCGCAGAAAACCCTATTCGGTGATCCTGCTCGACGAGGTCGAGAAGGCGCATCCCGACGTCCACGAAATCTT CTTCCAGGTCTTCGACAAGGGAATGATGGACGACAGCGAGGGCCGCCGGATCGATTTCAAGAACACCCTGATCCTGCTCA CCTCGAATGTCGGCTCCGAAGTTATCATGGACCGCACAAGGAATGGCACGCTGCGGACCGGGCTCGACGATCTGGATACC GCCTTGCGCAGCCCATTGCTGAAGGTCTTCCCGGCTGCCTTCCTTGGCCGGGTGGTGACCATTCCTTACTATCCGCTCTC TGATTCGATGATCGAGGCGATCACTGGCCACCAGTTCGCCAAGATCGCTCGCCGGTTGCGGGCAACCAACGATGCGGAAC TGGTGATCGGCGACGGTGTCATGGATCTGGTCAAGGCCCGCTGCACCGAGATCGAATCCGGCGGGCGGATGATCGATGCC ATCCTGACCAACACGCTGCTGCCGGAACTGAGCCGCGGCGTGCTTAACCGGTCGCTCGAGGGCGAAAAGATGACCAAAGT CACCGTCGGCGCCTCCAAGGAAGGTTTCACTTATTCCTTCGAGTAG Protein sequence : MEQRRSSQSFKRKELVGKLDPVGVRAFKAAADSAKLRGNPYVELVHFIEQLVLSDRSDVQMIIADAGLDASRLTADMTRA VDKLPYGATSIEEFSDHIFHAIQEAWNLATLEFGVEEVRSAHILLSCLKTPVLEGLLSKISGEFDKIDADAVVARFADVV EGSLEGGAAIAVPAAETPKRTMGGDSALAKFATDLTQRAREGKIDPVVGRDPEIRQIVDILMRRRQNNPILTGEAGVGKT AVVEGFALRIAQGDVPPTLQGVSVRMLDVGLMQAGASVKGEFEKRLKAVIDEVQSSETPVILFIDEAHTLIGAGGAAGTG DAANLLKPALARGELRTIAATTWAEYKQHIEKDPALTRRFQVVKIDEPSEAVAVLMLRGVAGVLEQHHKVQILDEAIEAA VGLSHRYIPARQLPDKAVSLLDTACARVAISQHATPAEVEDIMRRRQALEVERGIIGREAAIGIEVAERQARVDTGLAES EITLAAAQQRWDREKVLVAEILELRARLRGEGVALDAATVGADAEPAAANAEKTKVAESSETEPPKAAQTDAETQAAADP AADLARLRALMAELAAAQGETPLILPSVDRNAVAAVVQDWTGIPTGRMLSSQTEKALKLAATLSERVVGQDHAMEMIAKR VQTSRAGLGAPEKPVGVFLLCGPSGVGKTETALALAETLYGGEQNLISINMSEFQEAHTVSTLKGAPPGYVGYGKGGILT EAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGMMDDSEGRRIDFKNTLILLTSNVGSEVIMDRTRNGTLRTGLDDLDT ALRSPLLKVFPAAFLGRVVTIPYYPLSDSMIEAITGHQFAKIARRLRATNDAELVIGDGVMDLVKARCTEIESGGRMIDA ILTNTLLPELSRGVLNRSLEGEKMTKVTVGASKEGFTYSFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-134 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-134 | 41 |
