Gene Information

Name : Mesci_6388 (Mesci_6388)
Accession : YP_004134538.1
Strain :
Genome accession: NC_014918
Putative virulence/resistance : Virulence
Product : type VI secretion protein, vc_a0107 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 335959 - 336498 bp
Length : 540 bp
Strand : -
Note : KEGG: mlo:mlr2337 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence :

ATGCCAGCCGAAAGCAAAGCCAAGGTCATCGAACGAAATCGCGCGCCGCGGGTGCAGATCGCCTACGATGTGGAAACCTA
CGGCAGCCCGACGACGATCGAACTGCCGTTTGTCATGGGCGTGATGGCCGACCTTGCCGGTGCTTCGCAAACCAAGGAAG
CGTCAAAGTCGGTGCTGGACCGCTCCTTTGTCGAGACCGACGCGAACCGCTTCCCAAAATTCATGGAGGCGCTCGGCCCC
CGCGTCAAAGCGCGGGTGAAGAACACGCTGCCGCAGGCCGAGGGCCAGGAGCGTGACGAGGAACTGGCGCTCGATCTTAC
ATTTTCCAAGATGGGTGATTTCGCCCCCGACAAGATTGCCGAGCAAGTTCCGCAACTGGCCGAGATCCTCAAGATGCGTC
GACAACTCGAGGAATTGCTCGGCTTCATGGATGGCCGTGTCGATGCTGAAAAGCGCATCGCGCAGCTTCTGAACAACGAA
CCGCTTCTTGGCAAGATTGCCAGCCAGGCGCTGGCCGACGACGACAAGGTTGGGGAATGA

Protein sequence :

MPAESKAKVIERNRAPRVQIAYDVETYGSPTTIELPFVMGVMADLAGASQTKEASKSVLDRSFVETDANRFPKFMEALGP
RVKARVKNTLPQAEGQERDEELALDLTFSKMGDFAPDKIAEQVPQLAEILKMRRQLEELLGFMDGRVDAEKRIAQLLNNE
PLLGKIASQALADDDKVGE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	1e-28	46

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Mesci_6388	YP_004134538.1	type VI secretion protein, vc_a0107 family	VFG2069	Protein	3e-29	44