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Name : Theam_1748 (Theam_1748) Accession : YP_004134136.1 Strain : Genome accession: NC_014917 Putative virulence/resistance : Unknown Product : DNA topoisomerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 15020 - 16966 bp Length : 1947 bp Strand : + Note : SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: pmx:PERMA_1975 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-co DNA sequence : GTGCTGGTAATCGTTGAGTCTCCCACCAAGGCAAAGAAAATCCAGTCCTTTTTAGGCAAAGGCTACACGGTTAAGGCCAG TTTAGGCCACGTCAGAGACCTGCCCCCAGACGAATTTGCAGTCTCAATAGAGGCTTTAGAGCAGGGGAAGTTTCCCTTCA AGTTCAAAGTCCTTGCGGGCAAAGGCAGAGTGGTTAAGGAGCTTCAGAGGCTCGCCTCCGGGGAGCTCGTTCTCTGTGCC TCAGACCCGGATAGAGAAGGGGAGGCCATCGCTTGGCACTTAGCCCAGCTACTCAAAGAAAAGGCTAAAGAGGTTAAAAG GATTGAGTTCCACGAAATAACGAAGAAAGCCCTCCAAGAGGCCGTAAAGAGGCCCAGGGAGATAGACCTCAACAGAGTCC GTGCCCAGTTCGCAAGGAGGGCGATAGACAGGATACTGGGCTACCTGATTAGCCCTGAACTCTCAAAGGAGCTGGGCAAA AGAGGCCTCTCTGCGGGCAGAGTTCAGTCAACCGCTTTGGCAGAAATCGTCAAGAGAGAGCGGGAGATAAAAGAGTTCGT CCCCAAGCCCTACTGGGTGGTTGAGGTAGAGCTTGAGAAAGACGGCAAAAAGTTCAGGGCAAGGACTGAGAAGTTCTGGG ACAAGAAAGAGGCTCAGGAAAACCTCAGGTTCCCCACGCTCCTTGTAATCAGGGCCGATAAGAGAAAGAAACTTGAAAAG CCCAAGGCTCCCTTTACAGCCTCAGCTCTCCAGCAGGAGGCCAACCGTCTCTTTAAGTGGAGCCCTGAATACACTATGAA GGTGGCTCAGGAGCTATTTGAGAACGGTTACATAACCTACCACCGTTCAGACTCCCCGAGGCTGTCTGAAGAAGCCGTCG GCTTTTTAAGGAACCTAATCCCCCGCCTTTTCGGCAAGGACTACCTTCCTGCAAAGCCTTTCGTTTATAAGGCCAAAGAG GGAGCTCAGGACGCCCACGAGGCAATTAGGCCGACTAAACTCACCCCGGAGGGAGCTCCCGAAAACCTCAAGGACAGGCT CACTCCTCAGCAGCTAAAGCTCTACACCCTTATCTGGAAAAGAACGCTTGCCTCACAAATGAAAGAGGCCGTCTGGAATA CTCAAACGGTAGTTCTGCAAAACGACAGGGGAGTCAAGTTCACGGCAAAGGGCAAGACCCTCGTCTTTGAGGGCTGGAGG AAGGTTTACGACGCTGAAGTGGAGGAAGACGGAGAGGGAATTCTTCCAGAGCTCAGGGTCGGGGAGAAGCTCCCTGCGAA GCTCAGGCTCAAGGAGGACAAGACAAAGCCCCCGGCCCGCTACACCGAAGGTTCTTTAGTTAAGTGGCTGGAGAAAACTG GAGTGGGCCGTCCCTCAACCTACGCTTCTACGGTGAAGACCCTGAAGGCAAGAAAGTACGTTGTCGTTAAGGGCGGCAAG ATGGTTCCAACGGAGACGGCCTTCCGGGTGATTGAGTTCCTTGAGGAAAAACACCCGTGGATACTCTCACCTGAGCTGAC CGCCCAGATGGAAAAACAGCTTGACCTTGTGGAGCAGGGGAAACTTGACTGGAGAAAGCCTGTTCTGGAGACGGTGGAGA AGGTTAGGGAGCTTCTGCCTCTCCTATCGGAAGAAAGGGACGACAGGCCTACCGAGAAACAGCTTGAGTTTGCCCGCAGT TTGGCTGAGAAGCTCAAGAAAGAGCTCCCTGCCGACGTTCTCCTCTCCAAGAAGAAGCTCTCAAAGTGGATAGACGGGGC AAAGAGGGAGCTTGCCAAGGAAAAGGCCAATGCTCCGCTGTCTGAAAAACAGGTTGCCGTCATAGAGAAGCACGGCGACG AAAAGGTCAGGGAAGCCCTCCTGAGGGGCGACTACGCCTACTGCCGAAAGTGGCTTGACGGGTTTTTCAGGGAGCTGAAG AGGAGCGGGAGGAGGAAGAAGAAGTGA Protein sequence : MLVIVESPTKAKKIQSFLGKGYTVKASLGHVRDLPPDEFAVSIEALEQGKFPFKFKVLAGKGRVVKELQRLASGELVLCA SDPDREGEAIAWHLAQLLKEKAKEVKRIEFHEITKKALQEAVKRPREIDLNRVRAQFARRAIDRILGYLISPELSKELGK RGLSAGRVQSTALAEIVKREREIKEFVPKPYWVVEVELEKDGKKFRARTEKFWDKKEAQENLRFPTLLVIRADKRKKLEK PKAPFTASALQQEANRLFKWSPEYTMKVAQELFENGYITYHRSDSPRLSEEAVGFLRNLIPRLFGKDYLPAKPFVYKAKE GAQDAHEAIRPTKLTPEGAPENLKDRLTPQQLKLYTLIWKRTLASQMKEAVWNTQTVVLQNDRGVKFTAKGKTLVFEGWR KVYDAEVEEDGEGILPELRVGEKLPAKLRLKEDKTKPPARYTEGSLVKWLEKTGVGRPSTYASTVKTLKARKYVVVKGGK MVPTETAFRVIEFLEEKHPWILSPELTAQMEKQLDLVEQGKLDWRKPVLETVEKVRELLPLLSEERDDRPTEKQLEFARS LAEKLKKELPADVLLSKKKLSKWIDGAKRELAKEKANAPLSEKQVAVIEKHGDEKVREALLRGDYAYCRKWLDGFFRELK RSGRRKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| top | ACP28824.1 | DNA topoisomerase I | Not tested | AbaR5 | Protein | 1e-68 | 41 |
| topA | ADI24145.1 | DNA topoisomerase I | Not tested | AbaR1 | Protein | 1e-68 | 41 |
