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Name : GYMC52_3628 (GYMC52_3628) Accession : YP_004134108.1 Strain : Genome accession: NC_014916 Putative virulence/resistance : Unknown Product : proprionate catabolism activator, Fis family Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 37562 - 39481 bp Length : 1920 bp Strand : - Note : TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: gyc:GYMC61_3598 proprionate catabolism activator DNA sequence : GTGTTTACATATAGCAAACTCACAAGGATTCTTCAAGAAGTTTTAGCTGAAAAACAATGGCCGGCCGAGTTTATACTTCA TGAAGTTTTAATTGAGGAAGCGATAAAAAAAGCACATGAAATCGAAAAAACTAATTCAGCTGATGTAATTGTTGCCTCAG GAGCTAATGCAACCGCGATTGAAGAACAGGGATTAAGTATCCCTGTAGTCCGAATTAAAGTAACAGGTTTTGATCTAGTG AATGCACTATGGCTTGCTAAGCGCATGAATAGACAAGCAGTAGTTATGTCTTATCAGGAACCAATTCCGCAGTTGGAACA GTTTCGTGATTTGTTTCGTGTAGATTTGATGCAGGAGGCTTACGATGGAGTTCACGATGCACAAGAGAAGTTATTACGCA TATTAGGAAGTGGGAAATCTGTGATTATTGGTGCAAGCTTAGTTAATGAACTTACGGAGCGAATGGGTGGACATAGTATT TTCATTTACTCTAGATCTTCTATTCGCCTAGCTTTGGAAACAGCTGTAGAGCTTGCAGATCAACGAAGGTCCGAAATTGA AAAAAGACAAAAGATACAAGCTATGATGCGTGCTGTTCATGAAGGGATTTTATATGTGGATACTAACGGACTTCTAATGG AGATTAATCCTGTTGCCGAAAAGTTGCTAGGCGTGTCTGCCCAGGATGTTATCGGGAAATCCATAGACAAAGTTGCTCCT GAGATTAAACTTGATGATGTGTTTAAGAGAGGGAAACCACTGCTCAATGTAGCGCAGAAGACAAAACAAGGTATGCTTTT AGTTAACCGAATTCCTGTAGTCCATCAAGGAGAACTAATTGGAGCTGTGGCAACAATTCAGGATGCGCAAGCCGTACAGA AAGCGGAGAAAGCCATCCGGCATCGGGTATATAGTAAAGGGCTTTTAGCCAAGGCAACATTCGAACATATTATCGGAAAA AACTCTACCTTTATGAAGTTAATCGACAAGGCGCAGCACTATGCCCAAACGGATGCTACAATCTTGATTCGTGGTGAGAC TGGAACGGGAAAAGAGTTATTTGCACAGAGTATTCATAACGCAAGCAATAGGAATCGCCATCCTTTTGTAGCAGTGAATT GTGCGGCTCTACCTGAATCAATTTTAGAAAGTGAACTATTTGGATATGAAGAGGGAGCGTTCACAGGAGCACGTAAGGGT GGAAAACAGGGATTGTTTGAGCTAGCTCACAGGGGAACCATTTTTCTGGATGAGATAGGTGAAATGTCCTTACCCTTGCA ATCCCGTCTTCTTCGAGTTTTACAGGAAAAAGAGGTAATGCGTCTTGGAAGTGACATGGTAATTCCTATCGATGTAAGAA TAATAGCAGCCACCAATCGTGACTTAAAATCGATGGTAAAAGACGGGTTGTTTAGGCAGGATTTGTACTATAGACTTAAT GTACTCTCAATTGAGCTACCACCTCTTAGAGAACGATTAGATGATTTACCCGACTTATTTCGTTTCTTTTTAAAGAATTA CAAATTAGATAAACAACTGATAGAGAAAGTCTTGTCTATTATGTTACCAGTACTGTGTCACCATAACTGGCCGGGAAATA TAAGAGAACTTGAAAATATTGCGGAGCGAGTTTCTGTTCTATTAAAAGCGCATGTCACTATGGACGAGGTATTGGCCGAA GTGAAGAAGGAGCTATTTGGGAGTCATATCGAAATTCTGGATTCAACTGATTTGACTAAAGAAGTTGAAAACTGGGAGCG ACAACGTATTTTACAGGTATTAAGAGAAGTGCGAGGAAGCAAAACCAAGGCAGCGGCTCTTCTAGGGATTAGTCGGACCA CCTTATGGAGAAAGATTAAGGATTACGGAATTGATAGATATGATGACGAGGAAAAATCTAATAATTTGTTTCAAAAATGA Protein sequence : MFTYSKLTRILQEVLAEKQWPAEFILHEVLIEEAIKKAHEIEKTNSADVIVASGANATAIEEQGLSIPVVRIKVTGFDLV NALWLAKRMNRQAVVMSYQEPIPQLEQFRDLFRVDLMQEAYDGVHDAQEKLLRILGSGKSVIIGASLVNELTERMGGHSI FIYSRSSIRLALETAVELADQRRSEIEKRQKIQAMMRAVHEGILYVDTNGLLMEINPVAEKLLGVSAQDVIGKSIDKVAP EIKLDDVFKRGKPLLNVAQKTKQGMLLVNRIPVVHQGELIGAVATIQDAQAVQKAEKAIRHRVYSKGLLAKATFEHIIGK NSTFMKLIDKAQHYAQTDATILIRGETGTGKELFAQSIHNASNRNRHPFVAVNCAALPESILESELFGYEEGAFTGARKG GKQGLFELAHRGTIFLDEIGEMSLPLQSRLLRVLQEKEVMRLGSDMVIPIDVRIIAATNRDLKSMVKDGLFRQDLYYRLN VLSIELPPLRERLDDLPDLFRFFLKNYKLDKQLIEKVLSIMLPVLCHHNWPGNIRELENIAERVSVLLKAHVTMDEVLAE VKKELFGSHIEILDSTDLTKEVENWERQRILQVLREVRGSKTKAAALLGISRTTLWRKIKDYGIDRYDDEEKSNNLFQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 2e-90 | 41 |
