Gene Information

Name : GYMC52_0889 (GYMC52_0889)
Accession : YP_004131507.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 927318 - 929456 bp
Length : 2139 bp
Strand : -
Note : KEGG: gct:GC56T3_2584 ATPase AAA; PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; Clp ATPase-like; SMART: ATPase AAA

DNA sequence :
ATGCGCTGCCAAGCATGCCAACAACGTGAAGCAACGGTGTTTGTCAACTTGCAATGGAACGGTGAAAAACAACAACTTCA
CCTGTGCCATGAATGCTATGAAAAACAAAAACAACAATTGTCGATTCCGATGATGAACTTCGGCTTTTCGCCGTTTTCCT
TTGATGACTTCTTTACTAGCCCGTTCACAGCCGCCAACGCGGGGATGAGCTCGCCAGAAACGATGGCGAAACGCCCGCAA
AGCCATAGCGGCGGATTTTTGGATCAGTTTGGCCGCAACTTGACGCAAATGGCCAAAGCGGGCTTGATCGATCCGGTCAT
CGGCCGCGACAAAGAAATCGCACGCGTCATGGAAATTTTAAACCGCCGCAACAAAAACAACCCGGTGTTGATTGGGGAGC
CGGGCGTCGGGAAAACGGCCATCGTTGAAGGGCTGGCGCTGAAAATTGCCGAAGGGCAAGTGCCAGAAAAACTGTTGAAC
AAAGAAGTGTACTTGCTTGACGTCGCTTCGCTTGTTGCCAACACCGGCATCCGCGGCCAATTTGAAGAGCGGATGAAACG
GCTCATCGCCGAACTGCAAGAGCGGAAAAACATCATCTTGTTCATTGACGAAATCCATCTGCTCGTCGGTGCTGGAGCCG
CTGAAGGCTCGATGGACGCGGGCAACATTTTAAAACCGGCGCTTGCCCGCGGCGAGCTGCAAGTCGTTGGGGCGACGACA
CTCAAAGAATACCGGCAAATTGAAAAAGACGCGGCTCTTGAGCGCCGCTTCCAACCGGTCATCGTCCAGGAGCCGACCGT
TGAGGAAGCGATCGCCATCTTAAAAGGCATTCAGCCAAAATATGAACAATTCCATCATGTCCGCTATACGGACGAAGCGA
TCGAAGCGTGCGTGAAATTGTCGCACCGCTACATTCAAGACCGCTTCCTCCCGGACAAGGCGATCGACTTGCTTGACGAG
GCCGGCTCGAAAGCGAACTTGCGCCTCGGCCCGACCGATGAAAAACAACTGCAAGAGCGGTTGATCCAAATCGCGAAAGA
AAAAGAACAAGCTGCGAAAGAGGAAAACTATGAACTGGCGGCGAAACTGCGCGCTGAAGAGCTGAAGCTTGAGAAACAAC
TCGAGCAAGGCGTCACCCAAGAACGCCCAACAGTCGATGTGGCGGACATCGAGCAAATCATTGCCGAGAAAACCGGCATC
CCGGTCGGCAAACTGCAAGCCGATGAAAAAGAAAAAATGAAACATCTCGAAGAAAACTTGGCGAAAAAAGTGATCGGCCA
AGCGGAGGCGGTGAAAAAAGTCGCGAAAGCCATTCGCCGCAGCCGCGCCGGCTTGAAAGCGAAACACCGCCCGATCGGTT
CGTTCTTGTTCGTCGGCCCGACCGGCGTCGGGAAAACGGAGCTCGCCAAAACGCTCGCCGAGGAGCTGTTTGGCACAAAA
GACGCCATGATTCGCCTCGATATGAGCGAATACATGGAGAAACATTCCGTCTCGAAGCTGATCGGTTCGCCGCCGGGCTA
TGTCGGCTTTGAAGAAGCCGGCCAGCTGACGGAAAAAGTGCGCCGCAACCCATACAGCATCATCTTGCTTGACGAGATTG
AAAAAGCGCACCCGGATGTGCAGCACATCTTCCTACAAATTTTGGAAGACGGCCGCTTAACCGACAGCCAAGGCCGCACC
GTCAGCTTCAAAGACACGGTCATCATTGCGACAAGCAACGCCGGCGCAACCGATAAAAAAATCACCGTCGGCTTTGAAAA
AGAGGGCAACGGGCAAACAAGCGTCCTTGACTCGCTCAGCGCCTACTTCAAGCCGGAATTTTTGAACCGCTTCGACGCCA
TCATCGAGTTCAAGCCGCTCGAAAAAGCGCACTTGCTTGAGATCGTCGACCTGATGCTCGCTGACGTCAAAGCAGCGATG
CGCGAACAAGGCATTGAACTCGAAGTGACCGAAACGGCGAAAGAAAAACTGGCCGAACTCGGCTACCATCCGGCCTTCGG
CGCCCGCCCGCTCCGCCGCGTCATCCAAGAGCATGTCGAAGACAACATCGCTGACTGCCTGCTTGACGCGGATCAATCGG
TGCGCGCAATCCGCATCGACGTTGAAGGGGACGCCATTGTGGCGAAAATCGAATCATAA

Protein sequence :
MRCQACQQREATVFVNLQWNGEKQQLHLCHECYEKQKQQLSIPMMNFGFSPFSFDDFFTSPFTAANAGMSSPETMAKRPQ
SHSGGFLDQFGRNLTQMAKAGLIDPVIGRDKEIARVMEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIAEGQVPEKLLN
KEVYLLDVASLVANTGIRGQFEERMKRLIAELQERKNIILFIDEIHLLVGAGAAEGSMDAGNILKPALARGELQVVGATT
LKEYRQIEKDAALERRFQPVIVQEPTVEEAIAILKGIQPKYEQFHHVRYTDEAIEACVKLSHRYIQDRFLPDKAIDLLDE
AGSKANLRLGPTDEKQLQERLIQIAKEKEQAAKEENYELAAKLRAEELKLEKQLEQGVTQERPTVDVADIEQIIAEKTGI
PVGKLQADEKEKMKHLEENLAKKVIGQAEAVKKVAKAIRRSRAGLKAKHRPIGSFLFVGPTGVGKTELAKTLAEELFGTK
DAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILEDGRLTDSQGRT
VSFKDTVIIATSNAGATDKKITVGFEKEGNGQTSVLDSLSAYFKPEFLNRFDAIIEFKPLEKAHLLEIVDLMLADVKAAM
REQGIELEVTETAKEKLAELGYHPAFGARPLRRVIQEHVEDNIADCLLDADQSVRAIRIDVEGDAIVAKIES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-156 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_0889 YP_004131507.1 ATPase AAA VFG0080 Protein 0.0 64
GYMC52_0889 YP_004131507.1 ATPase AAA VFG0079 Protein 8e-155 54