Gene Information

Name : GYMC52_0793 (GYMC52_0793)
Accession : YP_004131419.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 826190 - 827368 bp
Length : 1179 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gyc:GYMC61_1668 cystathionine beta-lyase

DNA sequence : 
ATGGAACAGGAATGGGCGTTTTCGACGAAACTGCTCCATAACGAATGGAAAGTCGACCGCGAAACGGGGGCGGTGAGCGT
GCCGATCCAGCACGCCTCCACGTTCCATCAGTTCGATTTCGATTCATTCGGCAAATACGACTACAGCCGCTCCAGCAACC
CGACGCGCGAGGCGCTTGAGGAAACGATCGCGGCGTTAGAAGGCGGAACGCGCGGGTTTGCGTTCGCCTCTGGTATGGCG
GCTATTTCAACGGCGTTTTTGCTTCTCTCAAAAGGCGACCACGTGCTTGTGACCGAAGACGTCTATGGCGGCACGTACCG
GATGGTTACGGAGGTGCTCGGCCGCTTTGGCATTGAATATACGTTTGTCGATATGACCGATTTAAACGCAGTGGCGGAAA
ACATCCGGGCGAACACGAAAGTCATTTATATGGAAACGCCGTCCAATCCATTGTTAAAAGTGACCGATATTCAAGGCGTC
GTCAAGTTGGCGAAGGCGCATGGCTGTTTGACATTCTTGGATAATACGTTCATGACGCCGGCGCTGCAGCGGCCGCTTGA
TCTTGGAGTCGATGTCGTCCTTCACAGCGCCACGAAATTTTTAGCCGGCCATAGCGACGTCGTCGCAGGATTGGCGGTGG
TGAAAGATGAAGAATTGGGAAAAGAATTGTACAAACTGCAAAACGCGTTTGGCGCTGTCCTTGGCGTCCAAGATGCGTGG
CTTGTGCTGCGGGGATTAAAAACGCTCCACGTTCGGCTGAAGCAGTCGTCTGAATCAGCGGCCGCCATCGCCAAGTATTT
GGCTTGTCATCCAAAGGTCGAAAAAGTGTATTATCCGGGGCTTTCGCACCACCCAGGCCATGACATCCAGCGCCATCAGG
CGGCCGGGTTTGGCGCTGTGCTGTCGTTCCGCTTAGCCGATGAAGAAGCGGCTCGGACGTTCGTCCGAAACGTCCGCCTG
CCGGTGTTTGCTGTCAGCCTTGGGGCGGTCGAGTCAATTTTATCGCATCCAGCGAAAATGTCGCATGCGGCGATGCCAAA
AGAAGAGCGGCTCCGGCGCGGCATTACCGACGGCTTGCTGCGGCTGAGCGTCGGGCTTGAGGATGTGAACGATTTGATCC
GCGATTTCGAGCAGGCGTTGTCGTTTGTGAAAGAGCGGCCGTCGGTTTCAACGACATAG

Protein sequence : 
MEQEWAFSTKLLHNEWKVDRETGAVSVPIQHASTFHQFDFDSFGKYDYSRSSNPTREALEETIAALEGGTRGFAFASGMA
AISTAFLLLSKGDHVLVTEDVYGGTYRMVTEVLGRFGIEYTFVDMTDLNAVAENIRANTKVIYMETPSNPLLKVTDIQGV
VKLAKAHGCLTFLDNTFMTPALQRPLDLGVDVVLHSATKFLAGHSDVVAGLAVVKDEELGKELYKLQNAFGAVLGVQDAW
LVLRGLKTLHVRLKQSSESAAAIAKYLACHPKVEKVYYPGLSHHPGHDIQRHQAAGFGAVLSFRLADEEAARTFVRNVRL
PVFAVSLGAVESILSHPAKMSHAAMPKEERLRRGITDGLLRLSVGLEDVNDLIRDFEQALSFVKERPSVSTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-92 55
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-86 50
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-85 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_0793 YP_004131419.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 7e-66 42