|
Name : GYMC52_3418 (GYMC52_3418) Accession : YP_004133907.1 Strain : Geobacillus sp. Y412MC52 Genome accession: NC_014915 Putative virulence/resistance : Virulence Product : lipopolysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3944 EC number : - Position : 3455811 - 3456554 bp Length : 744 bp Strand : - Note : PFAM: lipopolysaccharide biosynthesis protein; KEGG: gct:GC56T3_3315 lipopolysaccharide biosynthesis protein DNA sequence : ATGGAAGAAACAATCAGCCTGCGCGAGCTGTTCGATACATTGCGCAAACGGCTTTGGCTCATCGTCCTGATCACCGCGCT TGCCACCGTTGTAAGCGGTGTGGTCAGCTACTTTATATTGACGCCGATTTACGAGGCGTCGACGCAAATTCTCGTCAACC AGGCGAAATCCGAGCAGCAGCTCTACAACTTCAATGAAATCCAAACGAACGTGCAGCTCATCAACACGTACAGCGTCATC ATTAAAAGCCCGACGATTTTAGAAAAAGTGAAAGACGAGCTCCACCTCGACCGGACGCTTGACGAACTGAACGAACAAAT CCAAGTCTCAAGCGAAAAAGACTCACAAGTGTTCTCTGTCACCGTCCAAGACCCAGATCCAGCCATGGCGGCCAAGATCG CCAACAAAACGGCGGAAGTGTTCAAAAACGAAATCGTCAAAATCATGAACATCGACAACGTCACCATTCTCTCGAAAGCG GAAGTGAAAGAGCATCAAGCTCCGGTCAAGCCGAAGCCGCTTCTCAACATGGCCATCGCCTTTGTCGTCGGCCTTATGAC GGGTGTGGGACTTGCTTTTCTGCTTGAATATTTGGATAACACGATCAAAACGGAAGAAGATGTCGAAAAACATCTTGGCC TGCCGGTGCTCGGCGCGGTCAGTTTAATCACGGCTGAAGGCGGCCAAAAAGCGAGACGCGAATCCGCCATTCCACAAACA AGAGGTGAAACCATTGGCTCGTAA Protein sequence : MEETISLRELFDTLRKRLWLIVLITALATVVSGVVSYFILTPIYEASTQILVNQAKSEQQLYNFNEIQTNVQLINTYSVI IKSPTILEKVKDELHLDRTLDELNEQIQVSSEKDSQVFSVTVQDPDPAMAAKIANKTAEVFKNEIVKIMNIDNVTILSKA EVKEHQAPVKPKPLLNMAIAFVVGLMTGVGLAFLLEYLDNTIKTEEDVEKHLGLPVLGAVSLITAEGGQKARRESAIPQT RGETIGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1A | AAA64640.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-37 | 43 |
| SSP0060 | YP_300150.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-36 | 42 |
