Gene Information

Name : GYMC52_3319 (GYMC52_3319)
Accession : YP_004133813.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3356656 - 3357015 bp
Length : 360 bp
Strand : -
Note : KEGG: gct:GC56T3_3203 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n

DNA sequence :
ATGCGCCAACACATGATCAACCAAGTCGTGTTGGTCGGCCGGTTGACGAAAGATCCCGAGCTTCGCTACACGGCCGAAGG
GGCTGCCGTCGCGACTGTCACGCTGGCGGTGGCGAGAAATTTCCGCAACGCGGAAGGGGGGATTGACGCCGATTTCGTTC
CATGCGTTTTATGGCGGAAAACGGCGGAACATACCGCCAATTATTGCCGAAAAGGATCGATGGTGGCGGTGACGGGGAGA
ATCCAAACGCGCCGCTACGATAAAAAAGACGGTCAACGCGTCTATGTCACCGAAGTCGTCGCGGAGTCCGTCCAATTTCT
CCACTCTGGAAAGAAACCAGAATGGCCGGAGCACGTATAG

Protein sequence :
MRQHMINQVVLVGRLTKDPELRYTAEGAAVATVTLAVARNFRNAEGGIDADFVPCVLWRKTAEHTANYCRKGSMVAVTGR
IQTRRYDKKDGQRVYVTEVVAESVQFLHSGKKPEWPEHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-22 61
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-22 61
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-22 61
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-22 60
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-23 60
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 9e-23 59
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 4e-23 54
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-22 54
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 7e-23 53
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-23 53
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-23 53
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 7e-23 53
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 1e-14 49
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-14 49
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 6e-14 41