Gene Information

Name : GYMC52_2295 (GYMC52_2295)
Accession : YP_004132840.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2356377 - 2357273 bp
Length : 897 bp
Strand : -
Note : KEGG: gct:GC56T3_1188 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
TTGGAATACGAGTTGAAAGATTTTCTGCATTATTTGACGGTGGAGCGGAATTTGGCGCACAATACGATCGTTTCGTATGA
ACGCGATTTGAAAAAATACGTCCGCTATTTGCGCCAAGTCGAGCAGCTTCAGGCGTGGGGCGAAGTGGAGCGCCTCCATA
TTCTCCATTTTTTAAAGTTTTTAAGCGAACAAGGGCAATCGGCGCGGACGATCGCCCGCCATTTGGCGTCGATCCGTTCG
TTTCATCAGTTTTTGCTAAGGGAGAAAATCGCGGCGCAAGACCCGACCGTCCATATCGAAACGCCGCAGTTTGAACGGAC
GCTGCCGAAAGTGCTGTCGGTCGAGGAAGTCGAGGCGCTGCTTGCAGCGCCGCAAGTGAGCACACCGTTTGGGCTGCGCG
ACAAGGCGATGCTGGAGCTGTTGTATGCGACCGGCATGCGCGTCAGCGAACTCGTGCAGCTGAATTTGGCTGACGTGCAT
TTGACGATGGGGTTTGTCCGCTGCTATGGAAAAGGGCGGAAAGAGCGGATCGTGCCGATCGGGCGCATGGCGATTGAAGC
GCTTGCCCACTATTTGGAGCGAGGGCGCCCGCAGCTTGTCAATCCGCGACGGCGGGCAACGGAGGCGCTGTTTTTGAACC
ATTATGGCCAGCGGTTGACACGGCAAGGGTTTTGGAAAATTTTAAAGCGGCTCGCGAAAGAAGCCGGCATCGAAAAAGAA
TTGACGCCGCATACGCTTCGGCATTCGTTTGCGACGCATCTGCTTGAGAACGGAGCCGATTTGCGCGCTGTGCAAGAGTT
GCTTGGGCATGCCGACATTTCGACGACGCAAATGTATACGCATGTTACGAAAACGCGCCTAAAAGACGTGTACAAACAGT
ACCACCCGCGCGCCTAG

Protein sequence :
MEYELKDFLHYLTVERNLAHNTIVSYERDLKKYVRYLRQVEQLQAWGEVERLHILHFLKFLSEQGQSARTIARHLASIRS
FHQFLLREKIAAQDPTVHIETPQFERTLPKVLSVEEVEALLAAPQVSTPFGLRDKAMLELLYATGMRVSELVQLNLADVH
LTMGFVRCYGKGRKERIVPIGRMAIEALAHYLERGRPQLVNPRRRATEALFLNHYGQRLTRQGFWKILKRLAKEAGIEKE
LTPHTLRHSFATHLLENGADLRAVQELLGHADISTTQMYTHVTKTRLKDVYKQYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-57 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-57 45