Gene Information

Name : GYMC52_1966 (GYMC52_1966)
Accession : YP_004132525.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2035934 - 2037442 bp
Length : 1509 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2837 aldehyde dehydrogenase

DNA sequence :
ATGCCAAGGAGGAAGGGGAAGCCACTGATGAGGATCAAGCAACATTATCCACTGTTTATTAACGGCCAGTATGTCGAGAG
CAGCAACGGAGAAGTGTTTGAAACGGTCAATCCGGCGACAGAAGAAGTGATTGCGACCGTCGCCAAAGCGACGAAAGAAG
ATGTAGACCATGCCGTCGAGGCGGCGCGCACGGCGTTTGAATCGGGGAAATGGCCAAAAATGACGGGGGCGAAGCGAGCT
CGCCTGTTGAATCAAATTGCCAATTTGATGAGAGAGCGATTCGATGACTTGGTGTATGCGGAAGTGCTAAACAGCGGTAA
AACGGTTGATGCGGCCAAAGGACAAATTATGCAAGCGATTGAGGATTTTGAATTTTATGCGGCCGCGGCAATTACGTTAC
AAGGCGATGTCAACCAAGTGCCAAATGGCTTTTTCAACTACACGGTCAAAGAGCCAGTCGGTGTATGCGGTCAAATCATC
CCGTGGAACTATCCGTTGATGATGGCGGCTTGGAAGCTCGCCCCGGCATTGGCGGCCGGATGCACGGTCGTGTTAAAGCC
GGCAAGCTATACGCCGATCACCGCTTATATGTTGGCGGAAATTTGCCAAGAGGCCGGGGTTCCGGACGGCGTCGTCAATG
TCATTGCTGGAAGCGGTTCCGAAATCGGCCCGTATATGACCGAACATCCTGGAATTGACAAAGTCGCCTTCACCGGGGAG
ACGGAAACGGGCAAGGATATTATGCGGCGCGCTTCGGAGACGTTGAAGCGGGTGACGCTGGAGCTTGGCGGGAAATCACC
GAACATCGTGTTTGATGATTGTGATATCGAAGCGGCGGTCAACGGTTCGCTTTATGGCATTTTTTACAACACGGGCCAGT
CGTGCGAAGCGCGTTCGCGGCTGTTTGTGCATGAAAACATTTATGATGAGTTTATGGAAAAGTTGATCGAAAAAGCTTCC
CGCATCCGCGTCGGCAACCCATTTGAAAAAGGGGTGCATATGGGCGCGGTCATTTCGCGAAGCCATCAGCAAGTGATCGA
CAGCTATGTCAAGCTGGCGGTTGAGGAAGGAGGCGAAATTTTATACGGTGGGAAAATTCCGGAAGGTGAGGAATTCGCGA
AAGGCTACTGGTACATGCCGACTATTATTGGCAATGTAAGAAACGACATGCGGGTGGCGCAGGAAGAAATTTTCGGTCCG
GTTGTCGTCGTCATGAAGTTTCACGATGAAGAAGAGGTCATCGAGCTGGCGAACGACACGATTTTTGGATTAGGATCAGC
CGTTTGGACGAAAGACCACGGAAAAGCCCATCGCGTTGCCGCGCGCATCCGCGCTGGAATTGTCATGATCAACTCGCCGA
TTTCCGCTTTCCCAGGCACGCCGTTTGGTGGATACAAGCAGTCGGGATTTGGCCGCGAGCTGGCTCTTGAGACGTTGAAC
TTGTATACCGAGACCAAAAGCGTTGTTTCTTATATCGGCGCTAAACCGTTGAACCTATTTGGCATTTGA

Protein sequence :
MPRRKGKPLMRIKQHYPLFINGQYVESSNGEVFETVNPATEEVIATVAKATKEDVDHAVEAARTAFESGKWPKMTGAKRA
RLLNQIANLMRERFDDLVYAEVLNSGKTVDAAKGQIMQAIEDFEFYAAAAITLQGDVNQVPNGFFNYTVKEPVGVCGQII
PWNYPLMMAAWKLAPALAAGCTVVLKPASYTPITAYMLAEICQEAGVPDGVVNVIAGSGSEIGPYMTEHPGIDKVAFTGE
TETGKDIMRRASETLKRVTLELGGKSPNIVFDDCDIEAAVNGSLYGIFYNTGQSCEARSRLFVHENIYDEFMEKLIEKAS
RIRVGNPFEKGVHMGAVISRSHQQVIDSYVKLAVEEGGEILYGGKIPEGEEFAKGYWYMPTIIGNVRNDMRVAQEEIFGP
VVVVMKFHDEEEVIELANDTIFGLGSAVWTKDHGKAHRVAARIRAGIVMINSPISAFPGTPFGGYKQSGFGRELALETLN
LYTETKSVVSYIGAKPLNLFGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-76 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-79 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-79 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-79 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 1e-77 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_1966 YP_004132525.1 aldehyde dehydrogenase VFG0082 Protein 1e-76 41