Gene Information

Name : GYMC52_1935 (GYMC52_1935)
Accession : YP_004132497.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2005804 - 2006532 bp
Length : 729 bp
Strand : +
Note : KEGG: gct:GC56T3_1538 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
TTGATTTATTTCCACCAAGTCAACAAATACTACGGCGATTTTCATGTGTTGAAAGACATTAACTTGACGATCAACCAAGG
GGAAGTCGTCGTCATCATCGGTCCATCCGGCTCGGGCAAAAGCACACTCGTGCGCTGCATCAACCGGCTCGAGACGATCT
CAAGCGGCGAATTGATCGTCGACGGCATTAAAGTGAATGACAAACACATCAACATTAACGAACTGCGGCGCAATATCGGC
ATGGTGTTTCAACATTTCAACTTATACCCGCACATGACCGTCTTGCAAAACATCACGTTGGCGCCGCGCAAAGTGCTCGG
CATGTCCGAAAAAGAAGCGAATGAAATCGCGATGTATTACTTGGAAAAAGTCGGCATTCCGGACAAAGCGAACGCCTATC
CGTCCGCGCTGTCCGGCGGTCAGCAGCAGCGCGTCGCCATCGCCCGCGGATTGGCGATGAAACCGAAAATCATGCTGTTT
GACGAGCCGACATCAGCACTTGACCCGGAAACGATCGGCGAAGTGCTCGATGTCATGAAGCAGCTGGCGAAAGAAGGGAT
GACGATGGTTGTCGTCACCCACGAGATGGGGTTTGCCCGCGAGGTGGCCGATCGCATCGTCTTTATGGATCAAGGGCGCA
TTTTAGAGGAAGCGCCGCCTGAGGAGTTTTTCGCGGCCCCGAAAGAAGAACGGGCGCGCGTCTTTTTAAGCCGCATTTTA
AACCATTAA

Protein sequence : 
MIYFHQVNKYYGDFHVLKDINLTINQGEVVVIIGPSGSGKSTLVRCINRLETISSGELIVDGIKVNDKHININELRRNIG
MVFQHFNLYPHMTVLQNITLAPRKVLGMSEKEANEIAMYYLEKVGIPDKANAYPSALSGGQQQRVAIARGLAMKPKIMLF
DEPTSALDPETIGEVLDVMKQLAKEGMTMVVVTHEMGFAREVADRIVFMDQGRILEEAPPEEFFAAPKEERARVFLSRIL
NH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-24 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-23 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_1935 YP_004132497.1 ABC transporter NC_012469.1.7686878. Protein 2e-31 46
GYMC52_1935 YP_004132497.1 ABC transporter BAC0316 Protein 8e-30 41