Gene Information

Name : GYMC52_1888 (GYMC52_1888)
Accession : YP_004132453.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1954297 - 1955745 bp
Length : 1449 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: gyc:GYMC61_2758 betaine-aldehyde dehydrogenase

DNA sequence :
ATGATATACGTCAACGGAAAATGGAGCAAAGGAGAAGGAAAAAAAAGACCAATCATCAATCCGGCGAATGAGGAAATCAT
TATAGAAATCAATGAAGCATCCCAACAACAAGCCGTAGAAGCGATCCAAGCAGCTCGTCATGCCTTTCAATATACCGATT
GGCCATTCAATCCAGCAAAACGGATCGCTGCGCTTCGCCAATTGGCGGACCTGTTGGAACAAAACGCGGAAACATTCGCT
TCGATCGAGACGTTGAATACAGGAAAACCGATTCGCGAGTCGCGCCTCGATGTCAGCGATTCAATCCAATGCCTTCGTTA
CTACGCCGATTTTGTTGAGCAACGGGCCATCGAGGAAACCAAAAGAACCGATGGCACGACAAGCAAAATCATTGAGGTGC
CAATCGGGGTATGCGCGTTGATTGTTCCTTGGAATTTTCCTCTCTTGTTAGGAATATGGAAACTGGCTCCAGCGCTTGCG
GCTGGAAATACAGTGGTGTTTAAACCATCAGAACTGACTCCGTTATCGTTCATAGAACTGACAAAGCTGATCGATTCCAT
CGGTCTCCCGCCGGGCGTGTTTAATCTTGTTCCTGGAGGCGGTTCGCCGGTTGGAGAAACATTGGTGACACATCCTGATG
TGGAAAAAATATCGTTTACCGGCGGAACGGAAACCGGACGATGGATTTACGAACAAGGCGCTCGTCGCTTGAAGCGAGTG
TCTCTGGAACTCGGCGGCAAATCCCCGCTGCTCATTTTTGACGATGCGGATCTTACTAGCACCATCGAGTGGGCGCTGTT
TGCTTCCTTTCTCAATCAAGGAGAAGTGTGTGTGGCTGCTTCGCGAATTCTTGTTCAACGACACGTTTATGATTCGTTTA
TCGATCAGCTGATCAAAAGGCTGGCTTCCCTCCATATTGGAGATCCTTTCGAGGAAAACACTGAGATGGGACCATTAATC
AGCTCCTCACATTTAGAAAAAGTGGAAACGTATATCCAGATCGGCTTGCAGGAAGGAGGAGTACTGCTGCAGGGAGGAGA
ACGAATCAAAGAACGGGGGTATTATCTCACCCCTGCCGTTTTCGCCCATGTCCGTCAAGACATGCGCATCGTCCAAGAAG
AAATCTTTGGCCCTGTCATAACCGTACAACCGTTTGAACATGACGCAGAAGCCATCGGACTCGCGAACGATACGATATAC
GGACTAGCAGCTGGCATATTCAGCCGTGATCTCGAACGGGCGGAACAAATCGCCGGAAAATTGAGAGCAGGAACGATTTG
GATTAACAGCTATCATACTCCCTATGTCGATGCCCCTTGGGGAGGATTGAAACAAAGCGGAATCGGCCGGGAGCTTGGGC
CGCAAGGATTTACCGCTTTCACCGAAGCAAAACATGTCAACATCAGCCAACATGGCCACCCGCTCGGATGGTATTCGTCG
TACTCCTGA

Protein sequence :
MIYVNGKWSKGEGKKRPIINPANEEIIIEINEASQQQAVEAIQAARHAFQYTDWPFNPAKRIAALRQLADLLEQNAETFA
SIETLNTGKPIRESRLDVSDSIQCLRYYADFVEQRAIEETKRTDGTTSKIIEVPIGVCALIVPWNFPLLLGIWKLAPALA
AGNTVVFKPSELTPLSFIELTKLIDSIGLPPGVFNLVPGGGSPVGETLVTHPDVEKISFTGGTETGRWIYEQGARRLKRV
SLELGGKSPLLIFDDADLTSTIEWALFASFLNQGEVCVAASRILVQRHVYDSFIDQLIKRLASLHIGDPFEENTEMGPLI
SSSHLEKVETYIQIGLQEGGVLLQGGERIKERGYYLTPAVFAHVRQDMRIVQEEIFGPVITVQPFEHDAEAIGLANDTIY
GLAAGIFSRDLERAEQIAGKLRAGTIWINSYHTPYVDAPWGGLKQSGIGRELGPQGFTAFTEAKHVNISQHGHPLGWYSS
YS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-67 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_1888 YP_004132453.1 aldehyde dehydrogenase VFG0082 Protein 4e-67 42