|
Name : GYMC52_1818 (GYMC52_1818) Accession : YP_004132388.1 Strain : Geobacillus sp. Y412MC52 Genome accession: NC_014915 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 1867129 - 1868466 bp Length : 1338 bp Strand : - Note : TIGRFAM: xylose isomerase; KEGG: gyc:GYMC61_2688 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel DNA sequence : ATGGCGTATTTCCCGAATATCGGAACCATTCCATATGAAGGACCGGAGTCGCGCAATCCGTTGGCGTTTAAGTTTTATAA TCCGGAAGAAAAAGTCGGCGACAAAACAATGGAGGAGCATTTGCGCTTTTCGGTCGCCTATTGGCATACGTTCACGGGGG ATGGATCGGATCCGTTTGGCGTCGGCAATATGATTCGTCCGTGGGACAAATATAGCGGCATGGATCTAGCAAAGGCGCGC GTCGAGGCGGCGTTTGAGCTGTTTGAAAAGCTGAACGTTCCGTTTTTCTGCTTCCATGACGTCGACATTGCGCCAGAAGG GGAAACGCTCAGCGAGACGTACAAAAACTTGGATGAAATCGTCGATATGATTGAAGAGTACATGAAAACAAGCAAAACGA AGCTGCTGTGGAATACGGCGAACTTGTTCAGCCATCCGCGCTTCGTTCACGGGGCGGCGACGTCGTGCAATGCCGATGTG TTCGCCTATGCGGCGGCGAAAGTGAAAAAAGGGTTGGAGATCGCCAAACGGCTCGGAGCGGAAAACTACGTGTTCTGGGG CGGCCGGGAAGGTTATGAGACGCTGCTGAACACGGACATGAAGCTGGAACTTGACAATTTGGCTCGCTTCTTGCACATGG CGGTCGACTATGCGAAAGAAATCGGATTTGACGGCCAGTTTTTGATCGAGCCGAAGCCGAAAGAGCCGACGAAGCACCAA TATGACTTCGATGTGGCGACGGCGTTGGCGTTCTTGCAGACATATGGGCTGAAAGATCATTTCAAATTCAATATTGAAGC GAACCATGCGACATTGGCCGGGCATACGTTTGAGCACGAGCTGCGCGTCGCCCGCATTCATGGCATGTTGGGCTCGGTCG ATGCGAACCAAGGCGATACGCTGCTCGGCTGGGATACGGACGAGTTCCCGACAGATTTGTATGCGACGACGCTGGCGATG TATGAAATTTTGCAAAACGGCGGCCTTGGGCGCGGCGGCTTGAACTTTGACGCGAAAGTGCGGAGAGGCTCGTTTGAACC GGAGGACTTGTTCTACGCTCATATCGCCGGGATGGACAGCTTTGCGATCGGTTTGAAAGTCGCCCATCGCTTGTTGGAAG ACCGCGTGTTTGAACAGTTCATCGAAGAACGGTACAAAAGCTATACAGAAGGCATCGGCCGCGAGATCGTCGAAGGGACG GCGGACTTCAAAAAGCTTGAGGAGTACGCCTTGCAGCTCGGCGAAATTCGCAATGCGTCCGGCCGTCTCGAACGCTTGAA AACGCTGCTCAACCAATATTTGTTGGAAGTCAGCGTGCCGAGCGTATCCCGTTCGTGA Protein sequence : MAYFPNIGTIPYEGPESRNPLAFKFYNPEEKVGDKTMEEHLRFSVAYWHTFTGDGSDPFGVGNMIRPWDKYSGMDLAKAR VEAAFELFEKLNVPFFCFHDVDIAPEGETLSETYKNLDEIVDMIEEYMKTSKTKLLWNTANLFSHPRFVHGAATSCNADV FAYAAAKVKKGLEIAKRLGAENYVFWGGREGYETLLNTDMKLELDNLARFLHMAVDYAKEIGFDGQFLIEPKPKEPTKHQ YDFDVATALAFLQTYGLKDHFKFNIEANHATLAGHTFEHELRVARIHGMLGSVDANQGDTLLGWDTDEFPTDLYATTLAM YEILQNGGLGRGGLNFDAKVRRGSFEPEDLFYAHIAGMDSFAIGLKVAHRLLEDRVFEQFIEERYKSYTEGIGREIVEGT ADFKKLEEYALQLGEIRNASGRLERLKTLLNQYLLEVSVPSVSRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-126 | 63 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-126 | 63 |
