Gene Information

Name : GYMC52_1683 (GYMC52_1683)
Accession : YP_004132261.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Unknown
Product : alpha,alpha-phosphotrehalase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 1727129 - 1728820 bp
Length : 1692 bp
Strand : -
Note : TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: gyc:GYMC61_2553 alpha,alpha-phosphotrehalase; SMART: alpha amylase catalytic sub domain

DNA sequence :
ATGTCAACAACCCCTTGGTGGAAAAAAGCGGTCGTTTATCAAATTTATCCGAAAAGCTTCTACGACACGAATGGAGACGG
CATCGGCGATTTGCCGGGCGTGATCGAGAAGCTCGATTATCTACAAGAACTGGGCGTCGATGTCATTTGGCTGACGCCGA
TCTACGCGTCGCCGCAGCGCGACAACGGTTATGACATCAGCGATTATTTCCGCATCCATCACGAATACGGAACGATGGGC
GATTTTGACCGTCTGCTTCACGAAGTGCATGCGCGCGGCATGAAGCTGGTGATGGACATGGTCGTCAACCATACCTCAAC
CGACCATGAATGGTTTAAGCAGGCGCGCTCCTCGAAAACGAACCCATACCGCTCGTTTTACATTTGGCGCGACCCGAAGC
CGGACGGCGGAGCGCCGAACAACTGGCAATCGAAATTCGGCGGCTCGGCGTGGGAATACGACGAACAAACCGGCCAATAT
TACTTGCATTTGTTCGATGTGACACAAGCGGACTTGGACTGGGAAAACGAAGAGCTGCGCCGCCGCATTTATGACATGAT
GCATTTTTGGCTCCAAAAAGGAGTGGACGGCTTTCGGCTTGACGTCATCAACTTGTTGTCAAAAGATCAGCGCTTCCCGG
ATGACGACGGTTCGGTGCCGCCGGGGGACGGGCGCCGCTTTTATACGGACGGACCGCGCATTCATGAGTTTTTGCAGGAA
ATGAATCGAGAGGTGTTTTCAAAATACGACATCATGACAGTGGGGGAAATGTCGTCGACGACGATCGATCATTGCATCCG
GTATACGAACCCGGAAAACCACGAGCTCAATATGACGTTTAACTTCCATCACTTGAAGGTCGATTACCCGAATGGGGAAA
AATGGGCGGTCTCCCCGTTTGACTTTCTAGCTTTAAAACGCATTTTGTCCGAATGGCAAGTCCGGATGTATGAAGGCGGG
GGCTGGAATGCGCTCTTTTGGTGCAACCACGATCAGCCGCGCATCGTGTCGCGCTATGGCGATGACGGGACGTATTGGAA
AGAATCAGCCAAAATGTTGGCGACGACGATCCATTTAATGCAAGGGACGCCATACATTTACCAAGGCGAAGAAATCGGCA
TGACCGACCCGAAATTCACCGATATTCGCGACTACCGCGACGTTGAGTCGCTCAACATGTACCGGATTTTGCGAGAACAA
GGCAAAAGCGAGCAAGAAGTGATGGAAATTTTGCGGCGAAAATCGCGCGACAATTCCCGCACGCCGATGCAATGGGACGA
CAGCCCGCATGCCGGTTTCACGTCTGGGACGCCGTGGATTCGCGTCGCCGACAACTACCGGCGCATTAACGTGAAACAGG
CGCTCGCCGACCGCGACTCGATTTTCTACCATTATAAGCGGCTGATTGAGCTGCGCAAACAGTATGATCTCATTACGACC
GGGCGCTATGAGCTGTTGCTTGCGGACGATCCGCATATTTTCGCCTATATGCGTCATGGCGATGGAGAAAAGCTGCTTGT
TGTCAACAATTTTTATCCAGTCGAAACGATGTTCACGCTGCCGAAAGAAGCGGGAGCCGATGGCTATACGGGAGAACTGC
TGCTTGCCAATTATTCGGACGCGCCGGCCGATTTTCGCCGCATGCAACTGCGCCCATACGAATCGGTTGTTTATCTTTTG
CGCCGGCCGTGA

Protein sequence :
MSTTPWWKKAVVYQIYPKSFYDTNGDGIGDLPGVIEKLDYLQELGVDVIWLTPIYASPQRDNGYDISDYFRIHHEYGTMG
DFDRLLHEVHARGMKLVMDMVVNHTSTDHEWFKQARSSKTNPYRSFYIWRDPKPDGGAPNNWQSKFGGSAWEYDEQTGQY
YLHLFDVTQADLDWENEELRRRIYDMMHFWLQKGVDGFRLDVINLLSKDQRFPDDDGSVPPGDGRRFYTDGPRIHEFLQE
MNREVFSKYDIMTVGEMSSTTIDHCIRYTNPENHELNMTFNFHHLKVDYPNGEKWAVSPFDFLALKRILSEWQVRMYEGG
GWNALFWCNHDQPRIVSRYGDDGTYWKESAKMLATTIHLMQGTPYIYQGEEIGMTDPKFTDIRDYRDVESLNMYRILREQ
GKSEQEVMEILRRKSRDNSRTPMQWDDSPHAGFTSGTPWIRVADNYRRINVKQALADRDSIFYHYKRLIELRKQYDLITT
GRYELLLADDPHIFAYMRHGDGEKLLVVNNFYPVETMFTLPKEAGADGYTGELLLANYSDAPADFRRMQLRPYESVVYLL
RRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 4e-141 52