Gene Information

Name : GYMC52_1645 (GYMC52_1645)
Accession : YP_004132225.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1685727 - 1686479 bp
Length : 753 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gyc:GYMC61_2515 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGAGGCTAAAAGGAAAAGCGGCGATTGTCACCGGCGGCGCGAGCGGCATCGGCCGGGCGACGGCGATTCGCTTTGCGGA
AGAAGGCGCCAAAGTGGCGGTGAGCGACATCAATGAGGAAGGAGGGGAAGAAACGGTCCGCCTGATTCGGGAAAAAGGAG
GGGAGGCGATTTTTGTCCAAACGGACGTAGCCGATTCCAAGCAAGTGAGCCGCCTTGTCCAAACGGCGGTTGATGCCTTT
GGCGGCCTACATATTCTCTTTAATAATGCCGGCATCGGCCATTCGGAAGTGCGGAGCACCGACTTGTCTGAAGAAGAGTG
GGACCGGGTCATTAATGTCAACTTAAAGGGCGTGTTTCTTGGCATCAAATACGCGGTGCCGGCACTGAAAGCATCCGGGG
GCGGGGCGATTGTCAACACGGCCAGCCTGCTCGGGCTGAAGGGAAAAAAATATCAAGCCGCCTACAACGCATCAAAAGCA
GGTGTCATTTTGTTAACCCAAAATGCCGCATTGGAATACGGGAAATTTAACATTCGCGTCAACGCCATTGCGCCGGGGGT
CATTGATACGAACATCATTACTCCGTGGAAACAAGATGAGCGCAAATGGCCGATCATCTCGAAGGCGAACGCCCTCGGCC
GCATCGGGACGCCAGAGGAAGTGGCAAACGCGGTGTTGTTTTTGGCGTCCGATGAAGCGTCGTTTATCACCGGCGCAACA
TTATCGGTTGACGGTGGCGGGCTGACGTTTTAG

Protein sequence : 
MRLKGKAAIVTGGASGIGRATAIRFAEEGAKVAVSDINEEGGEETVRLIREKGGEAIFVQTDVADSKQVSRLVQTAVDAF
GGLHILFNNAGIGHSEVRSTDLSEEEWDRVINVNLKGVFLGIKYAVPALKASGGGAIVNTASLLGLKGKKYQAAYNASKA
GVILLTQNAALEYGKFNIRVNAIAPGVIDTNIITPWKQDERKWPIISKANALGRIGTPEEVANAVLFLASDEASFITGAT
LSVDGGGLTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-38 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-37 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 5e-37 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 5e-37 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-37 41