Gene Information

Name : GYMC52_0012 (GYMC52_0012)
Accession : YP_004130670.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 21717 - 22601 bp
Length : 885 bp
Strand : +
Note : KEGG: gct:GC56T3_0011 pyridoxine biosynthesis protein; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; indole-3-glycerol phosphate synthase

DNA sequence : 
TTGGCATTGACAGGTACGGACCGCGTCAAACGCGGCATGGCGGAAATGCAAAAAGGCGGCGTCATCATGGACGTCGTGAA
CGCAGAACAGGCGAAAATCGCTGAAGCGGCAGGGGCTGTCGCGGTTATGGCGCTCGAGCGCGTCCCGGCGGACATTCGCG
CCGCTGGCGGTGTCGCGCGCATGGCCGACCCGACGGTGATCGAAGAAGTGATGAACGCCGTTTCGATCCCAGTCATGGCG
AAAGTGCGGATCGGTCACTATGTTGAGGCGCGTGTCTTAGAGGCGCTTGGTGTCGACTACATTGACGAAAGTGAAGTATT
AACGCCGGCTGATGAGGAATTCCATATTGACAAACGGCAGTTTACCGTTCCATTTGTGTGCGGTTGCCGCGATTTAGGGG
AAGCGGCGCGCCGCATTGCAGAAGGGGCATCGATGTTGCGAACCAAAGGAGAGCCGGGGACAGGCAACATTGTTGAGGCC
GTGCGCCATATGCGCAAAGTGAACGCGCAAATTCGCAAAGTCGTCAACATGAGCGAAGATGAGCTTGTCGCTGAGGCGAA
ACAGCTCGGGGCTCCGGTTGAGGTGCTGCGCGAGATCAAGCGGCTTGGCCGCCTGCCGGTCGTCAACTTTGCCGCCGGCG
GTGTCGCGACACCGGCTGACGCTGCCTTGATGATGCACTTGGGTGCGGACGGTGTCTTTGTTGGGTCTGGCATTTTCAAA
TCGGAAAATCCGGAAAAATACGCGCGCGCGATCGTAGAGGCGACGACTCATTACGAAGACTATGAATTGATCGCACACTT
GTCGAAAGGATTGGGCGGCGCGATGCGCGGCATCGATATCGCGACATTGTTGCCGGAGCACCGGATGCAAGAACGCGGCT
GGTAA

Protein sequence : 
MALTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMNAVSIPVMA
KVRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQIRKVVNMSEDELVAEAKQLGAPVEVLREIKRLGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATTHYEDYELIAHLSKGLGGAMRGIDIATLLPEHRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 5e-75 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-75 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-75 65