Gene Information

Name : GYMC52_1395 (GYMC52_1395)
Accession : YP_004131993.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1447644 - 1448456 bp
Length : 813 bp
Strand : +
Note : KEGG: gyc:GYMC61_2267 ABC transporter protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence : 
ATGCATGGGTTGCAGGCGAAAGAGTTGACGCTATCCTATGGCGAGGCGATCGTTATTGACCGGTTGCATTTGACGATTCC
GAAAGGAAAAATCACGGTGTTCATCGGCGCGAACGGCTGCGGCAAGTCGACGTTGCTGCGCGCCTTGGCCCGGCTGCTAA
AACCAACAAGCGGCGCTGTGCTGCTGGATGGAAAAGAAATCGCCAAACAGCCGACAAAAGAAATCGCCCGCCGGCTCGCC
ATTTTGCCGCAGTCGCCTATGGCTCCGGAAGGACTGACCGTTTTGCAACTTGTGAAGCAAGGGCGCTACCCGTATCAAAC
GTGGTTCAAGCAATGGAGTGACGAAGATGAGCGGGCGGTTGTGCGGGCCCTAGAGGCAACTGGACTCGCCGAATTCGCCG
AGCGGCCGGTCGATTCGCTTTCCGGCGGACAGCGCCAACGCGCATGGATCGCCATGACATTAGCGCAAGAAACAGACATC
ATTTTGCTTGACGAGCCGACGACGTATTTGGATCTCGCGCATCAAATTGACATTTTAGATTTATTGTTTGAGCTGAATGA
AAAAGAACGGCGGACGATCGTCATGGTGCTTCACGATTTGAATTTAGCGTGCCGTTACGCCAATCATCTCGTCGCCATTC
GCGATAAAACGGTGTATGCCGAAGGAAAGCCGGAAGACGTCATTTCCCGCCAGCTCGTGAAAGATGTGTTCCAAATGGAT
TGCCAAATCACGTACGATCCGATCTTTGGCACCCCGCTTTGCATTCCGTATGGGAAAGGACGGCGAATTTTACAGAAAGA
AGGCGTATCGTGA

Protein sequence : 
MHGLQAKELTLSYGEAIVIDRLHLTIPKGKITVFIGANGCGKSTLLRALARLLKPTSGAVLLDGKEIAKQPTKEIARRLA
ILPQSPMAPEGLTVLQLVKQGRYPYQTWFKQWSDEDERAVVRALEATGLAEFAERPVDSLSGGQRQRAWIAMTLAQETDI
ILLDEPTTYLDLAHQIDILDLLFELNEKERRTIVMVLHDLNLACRYANHLVAIRDKTVYAEGKPEDVISRQLVKDVFQMD
CQITYDPIFGTPLCIPYGKGRRILQKEGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-63 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-63 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-62 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-58 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-58 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-58 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-58 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-53 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-53 46
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-52 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-52 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-52 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-52 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_1395 YP_004131993.1 ABC transporter BAC0164 Protein 1e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_1395 YP_004131993.1 ABC transporter VFG0925 Protein 2e-66 52
GYMC52_1395 YP_004131993.1 ABC transporter VFG1042 Protein 1e-53 47