Gene Information

Name : GYMC52_1090 (GYMC52_1090)
Accession : YP_004131700.1
Strain : Geobacillus sp. Y412MC52
Genome accession: NC_014915
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1122906 - 1124954 bp
Length : 2049 bp
Strand : +
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; KEGG: gyc:GYMC61_1967 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase

DNA sequence :
GTGAACGAAGCGATGCAGCAGCCGGTGACGGCGGTCAAAGGCATCGGTGAAGAGACGGCGGCGGCGCTTGCCGACATCGG
CATCGCGACGATCGGCGAGCTGCTCGCGTACGCCCCGTACCGCTATGATGATTACGAACAAAAAGATTTGGCCGCCGTCC
GCCATGAAGAAAAAGTGACAGTGGAAGGAAAAGTATACAGCGCCCCGCTGTTGACGTATTACGGAAAGAAAAAATCGCGC
CTTTCCTTCCGCATGCTGGCTGATCGCTACTTGATCACCGTTGTTTGTTTCAACCGTCCCTATTTGAAGGAAAAAATCGC
CCTGAACGAGACGGTGACGGTGATCGGCAAATGGGACCGGCATCGGCAAACGATCAACGCCTACGAACTTCGGTTCGGAC
CGGCTCCGGAGACCACCGGCATCGAGCCGGTTTACTCCGTGCGCAGCCCGCTGACGGTGAAAACGATGCGCCGGTTGATG
AAAGCGGCGTTCGAACAGTTTGGCGAGCACATCCCCGACCCGCTGCCGCCCGCTTTGCGCCGCGCTTATCGCCTTGTCGA
CAAACAAGAAGCGCTCCGCGCCCTTCATTTTCCGCGCACGCGCGAAGAATTGCATCAGGCGCGGCGCCGGCTCATCTATG
AGGAGTTTTTGTTGTACCAGCTGAAAATGCAGGCGCTCCGTCGATTGATGCGCGATGAGCGGCGCGGCGTCGTTCATTCG
TTTTCTGAAGAGCGGCTTTCGTCCTTTCTTTCCGGATTGCCGTTTGTCTTGACGAACGCCCAGCGCCGTGTCATCGGCGA
AATTTTGGCGGACATGCGCTCGCCGCGGCAAATGAACCGGCTTTTGCAAGGCGACGTCGGTTCTGGCAAGACGGTCGTTG
CCGCTGTCGCTCTTTACGCCGCCGCTTTGTCCGGATTTCAAGGAGCGCTGATGGTGCCGACGGAAATTCTGGCTGAACAG
CACGCCCGCTCGCTCGCCGAGCTGTTTGCCGATACGGATGTGACGATCGCGCTCTTGACAAGCTCAGTGAAGGGAAAGCA
GCGCAAAGCGGTGCTTGCCGAACTGGAAGAAGGAACAATTGATATCGTCGTAGGCACGCACGCCTTGATTCAAGAAGGAG
TGCAGTTTCGCCGGCTTGGCCTCGTTATTACGGACGAGCAGCACCGGTTTGGCGTCGAACAGCGCCGCGTTTTGCGTGAG
AAAGGGCATGCACCGGATGTATTGATGATGACGGCGACGCCGATTCCGCGCACACTCGCCATTACAGCGTTCGGCGACAT
GGACGTATCGGTGCTCGATGAAATGCCGGCCGGACGAAAAAAAGTCGAGACGTATTGGGTGAAGCATCATCAGTTCTCCC
GCGTGCTCGATTTTATCGAAAAGGAATTGCGCCGTGGTCATCAGGCGTATGTCATCTGTCCGCTCATTGAGGAGTCGGAC
AAATTGGATGTGCAAAACGCCATCGATGTCCATAGCCAGCTTGTCCATTATTATCGCGGGAAATATGAGATCGGCTTGAT
GCACGGCCGGCTGTCGGCCGACGAAAAAGAACGCGTCATGCGGGCGTTCAGCGAAAACCGCATCCATGTGCTCGTCTCGA
CGACGGTTGTTGAAGTCGGCGTGAATGTACCGAATGCGACGGTGATGGTCATTTACGACGCCGAACGGTTTGGCCTCGCC
CAGCTCCATCAGCTGCGCGGGCGGGTCGGGCGCGGCGACGCCCAGTCGTACTGCATTTTGATCGCCGACCCGAAATCGGA
AGTCGGCAAAGAACGAATGCGCATCATGACGGAAACGGCCGATGGGTTTGTGTTGGCCGAAAAAGATTTGGAGCTGCGCG
GTCCGGGCGATTTTTTCGGTACAAAACAAAGCGGGCTCCCGGAATTCCGCTACGGCGATCCAGTGCATGATTACCGCATT
TTGGAAGTCGCCCGCCGCGATGCCGCCAAGCTCGTTTCCTCGGCCGCGTTTTGGCGCGATGAGGCGTACGCCGGGCTGCG
CGCCGAGCTGGAAGCGTCCGGCCTACTCGACGGGGAAAAGCTAGATTAA

Protein sequence :
MNEAMQQPVTAVKGIGEETAAALADIGIATIGELLAYAPYRYDDYEQKDLAAVRHEEKVTVEGKVYSAPLLTYYGKKKSR
LSFRMLADRYLITVVCFNRPYLKEKIALNETVTVIGKWDRHRQTINAYELRFGPAPETTGIEPVYSVRSPLTVKTMRRLM
KAAFEQFGEHIPDPLPPALRRAYRLVDKQEALRALHFPRTREELHQARRRLIYEEFLLYQLKMQALRRLMRDERRGVVHS
FSEERLSSFLSGLPFVLTNAQRRVIGEILADMRSPRQMNRLLQGDVGSGKTVVAAVALYAAALSGFQGALMVPTEILAEQ
HARSLAELFADTDVTIALLTSSVKGKQRKAVLAELEEGTIDIVVGTHALIQEGVQFRRLGLVITDEQHRFGVEQRRVLRE
KGHAPDVLMMTATPIPRTLAITAFGDMDVSVLDEMPAGRKKVETYWVKHHQFSRVLDFIEKELRRGHQAYVICPLIEESD
KLDVQNAIDVHSQLVHYYRGKYEIGLMHGRLSADEKERVMRAFSENRIHVLVSTTVVEVGVNVPNATVMVIYDAERFGLA
QLHQLRGRVGRGDAQSYCILIADPKSEVGKERMRIMTETADGFVLAEKDLELRGPGDFFGTKQSGLPEFRYGDPVHDYRI
LEVARRDAAKLVSSAAFWRDEAYAGLRAELEASGLLDGEKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-88 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC52_1090 YP_004131700.1 ATP-dependent DNA helicase RecG BAC0356 Protein 5e-88 42