|
Name : Alide_0791 (Alide_0791) Accession : YP_004125444.1 Strain : Alicycliphilus denitrificans BC Genome accession: NC_014910 Putative virulence/resistance : Virulence Product : general secretory pathway protein e Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 842544 - 843944 bp Length : 1401 bp Strand : - Note : TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: dia:Dtpsy_0645 general secretory pathway protein E; SMART: AAA ATPase DNA sequence : ATGCGCCACCCCCTGCCCTACGCCTTTGCACGCAGCAGCCAGCTGCTGCTGGAAGACGACGGCCAGCAGCTCGTGCTCTG GCACGGCCCCCAGCCCGACGCCTGCGCGCTGTCCGAAGTGCTGCGCAAGCACGCCGTGCAACAGTTCATGCCGCTCGATG CCGCGCAGCTGGCCCAGCGCATCAGCGCGGCCTACGCGCAGAGCGAATCGAGCGCAGCCACCGTGGTCAGCGAGGTAGAG GAAGGCGCCGACCTCTCGCGCATGATGCAGGAGCTGCCCGCGGTCGAGGACCTGCTGGAATCGGCGGGCGACGCGCCCAT CATCCGTATGCTCAACGCCCTGCTCACGCAGGCCGTGCGCGACGGCGCGAGCGACATCCACATCGAGCCCTACGAGCGCC ACTCCAGCGTGCGCTTCCGCGTGGACGGCACGCTGCGCGAGGTGGTGCAGCCCAACCGCGCGCTGCACGCGGCGCTGATC TCGCGCCTGAAGATCATGGCCGACCTGGACATCTCCGAGAAGCGCCTGCCGCAGGACGGCCGCATCAGCCTGCGCCTGGG CACGCGCGCCATCGACGTGCGCGTCTCCACCCTGCCCAACGCCCACGGCGAGCGCGCCGTGCTGCGCCTGCTGGACAAGA GCGAAAGCAAGCTCAGCCTGGAATCCGTGGGCATGCAGGGCGGCGTGCTCGCGCGCTTCGAGCAGCTCATCGCGCAGCCG CACGGCATCATCCTCGTGACCGGGCCCACGGGCTCGGGCAAGACCACCACGCTGTATGCGGCGCTCGCGCGGCTCGACGC GAGCCGCAGCAACATCATGACGGTGGAAGACCCCATCGAGTACGAGCTGCCCGGCGTGGGCCAGACCCAGGTCAACGGCA AGATCGACCTGACCTTCGCCAAGGCCCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGATCATGATCGGCGAGATCCGC GACTTCGAGACCGCGCAGATCGCCATCCAAGCCTCGCTCACCGGCCACCTTGTGCTGGCCACGCTGCACACCAACGACGC GGCCAGCGCCATCACGCGCCTGACCGACATGGGCGTGGAGCCGTTCCTGCTCTCATCGTCGCTGCTGGGCGTGCTGGCCC AGCGCCTGGTGCGCAAGTACTGCGGCCACTGCCACGGCGGCGACCACGGCGCGGGCTGCGAGCATTGCGGCCACACGGGC TACGCAGGCCGCACGGGCGTGTTCGAGCTGCTCGTCGTGGACGACGCCATCCGCACCCAGATCCACGGCCAGGCTGCCGA GGCCGACGTGCGTGCCCAGGCCCTGGCCGGCGGCATGACGCTGATGCGCGACGACGGCGAGCGGCTGATCGCCGCGGGCA TCACCAGCCGCGAGGAAGTGCTGCGCGTGACGCGCGATTGA Protein sequence : MRHPLPYAFARSSQLLLEDDGQQLVLWHGPQPDACALSEVLRKHAVQQFMPLDAAQLAQRISAAYAQSESSAATVVSEVE EGADLSRMMQELPAVEDLLESAGDAPIIRMLNALLTQAVRDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALHAALI SRLKIMADLDISEKRLPQDGRISLRLGTRAIDVRVSTLPNAHGERAVLRLLDKSESKLSLESVGMQGGVLARFEQLIAQP HGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDPIEYELPGVGQTQVNGKIDLTFAKALRAILRQDPDVIMIGEIR DFETAQIAIQASLTGHLVLATLHTNDAASAITRLTDMGVEPFLLSSSLLGVLAQRLVRKYCGHCHGGDHGAGCEHCGHTG YAGRTGVFELLVVDDAIRTQIHGQAAEADVRAQALAGGMTLMRDDGERLIAAGITSREEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-89 | 57 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-89 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Alide_0791 | YP_004125444.1 | general secretory pathway protein e | VFG0182 | Protein | 1e-98 | 57 |
| Alide_0791 | YP_004125444.1 | general secretory pathway protein e | VFG2048 | Protein | 2e-90 | 56 |
| Alide_0791 | YP_004125444.1 | general secretory pathway protein e | VFG1876 | Protein | 2e-93 | 50 |
| Alide_0791 | YP_004125444.1 | general secretory pathway protein e | VFG2426 | Protein | 1e-57 | 44 |
| Alide_0791 | YP_004125444.1 | general secretory pathway protein e | VFG0233 | Protein | 7e-66 | 44 |
| Alide_0791 | YP_004125444.1 | general secretory pathway protein e | VFG0112 | Protein | 5e-65 | 44 |
