Gene Information

Name : Alide_0650 (Alide_0650)
Accession : YP_004125306.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Virulence
Product : general secretion pathway protein g
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 685397 - 685837 bp
Length : 441 bp
Strand : +
Note : KEGG: aav:Aave_4158 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGCATTTCGCAACCACCCTCCGTACCCCGCTGCAGGCGCGCCGCGCACGCGGCTTCACCCTGATCGAGCTGCTCGTCGT
CCTGGTCATCCTCACGCTGCTCGCTGGCCTCGTGGGCCCCAGGGTGCTCGACCAGCTCGGCGGCGCCAAAGCCAAGACGG
CGCGCGTGCAGATCGGCGAGATGGAGCAGGCCGTCGACCTGTTCAAGCTCGACGTGGGCCGCTACCCCAACGACGCCGAA
GGCCTGCGCGCCCTGGTCGAGCGTCCCGCCACGGTGCAAGGCTGGAACGGTCCCTATCTCAAGAAAGGCCTGCCCGTCGA
TCCCTGGGGCGCAGCCTACCAGTACAAATTCCCTGGCCGCCACGGCGGCCCCGACATCTTCTCCCTCGGTGCCGACGGCA
AGCCCGGCGGCGAGAGCGATAACGCCGACATCTACAACTGA

Protein sequence : 
MHFATTLRTPLQARRARGFTLIELLVVLVILTLLAGLVGPRVLDQLGGAKAKTARVQIGEMEQAVDLFKLDVGRYPNDAE
GLRALVERPATVQGWNGPYLKKGLPVDPWGAAYQYKFPGRHGGPDIFSLGADGKPGGESDNADIYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 7e-16 44
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-16 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_0650 YP_004125306.1 general secretion pathway protein g VFG0180 Protein 3e-18 51
Alide_0650 YP_004125306.1 general secretion pathway protein g VFG1871 Protein 5e-17 45
Alide_0650 YP_004125306.1 general secretion pathway protein g VFG2050 Protein 2e-16 44