Gene Information

Name : Alide_0457 (Alide_0457)
Accession : YP_004125118.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor nusg
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 475122 - 475712 bp
Length : 591 bp
Strand : +
Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: dia:Dtpsy_3251 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein

DNA sequence : 
ATGGTGGATGCCGTGGAAACCAATGGCGCTCAGCCTCCTGTTGATGCATCGGTGAATCCCGACTTGCGTTGGTACATCGT
GCACGCCTACTCCGGGATGGAGAAGGCGGTGGAGCGCAATATTCAGGAGCGCATCGTACGCTCCGGCATGCAGCACAAGT
TTGGCCGCATCCTGGTCCCGACCGAGGAGGTCGTGGAGATGAAGAATGGCCAGCGCAAGACCACCGAGAGGCGCTTGTTC
CCCGGCTATGTGTTCGTCGAAATGGTCATGGATGACGACACTTGGCATCTGGTGAAGCACACCAGCAAGGTCACTGGCTT
CGTGGGTGGGGTGAAGAATCGCCCTGCGCCCATTTCCGAGGAGGAAGTGCAGAAGATCGTGAGCCAGATGCAGCAAGGCA
CCGACAAGCCGCGCCACAAGATCGAGTTCATGGTCGGTGAACTGGTGCGCGTCAAGGAGGGGCCCTTCACGGACTTCAAT
GGTTCGGTGGAAGAGGTCAACTACGAGAAGAACCGCCTGCGGGTCTCGGTGATGATTTTCGGTCGTTCCACTCCCGTGGA
ACTGGAGTTCGGTCAGGTGGAGAAAACGTGA

Protein sequence : 
MVDAVETNGAQPPVDASVNPDLRWYIVHAYSGMEKAVERNIQERIVRSGMQHKFGRILVPTEEVVEMKNGQRKTTERRLF
PGYVFVEMVMDDDTWHLVKHTSKVTGFVGGVKNRPAPISEEEVQKIVSQMQQGTDKPRHKIEFMVGELVRVKEGPFTDFN
GSVEEVNYEKNRLRVSVMIFGRSTPVELEFGQVEKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 2e-49 56
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 2e-49 56