Gene Information

Name : Alide_4413 (Alide_4413)
Accession : YP_004128998.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : oligopeptide/dipeptide ABC transporter ATPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 4626689 - 4628563 bp
Length : 1875 bp
Strand : -
Note : TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: aav:Aave_1657 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase

DNA sequence :
ATGACGACCCATTCCCCCCATGCCGCCGTGCCCCTGCAACTGCCCGAGCAGCGCGTGCTGGCCGCGAGCGCGCTGAGCGT
GCGCTTCGCCACTTCCGAGCGCACAGTGGATGCCGTGCGCGATCTCTCCTTCCACGTGGACCGGGGCGAGACCCTGGCCA
TCGTGGGCGAGTCGGGCTCGGGCAAGTCCGTCACCTCGCTGGCGCTGATGCGCCTGGTGGAGCATGGCGGCGGCAGGATC
ATCGGCGGCTCGGCGCTCCTGCGCCGGCGCGGCGGCCAGGTGCTGGACGTGGCCCGGGCGACGCAGGCGCAGATGCGCGA
CGTGCGCGGCGCAGACGTGGCCATGATCTTCCAGGAGCCCATGACCTCGCTGAACCCGGTGTTCACCGCGGGCGAGCAGA
TTGCCGAATCCATCCGCGTGCACCAGGGAATGGACCGCGCCGGCGCGCGCGCCGAGGCGCTGCGCATGCTCGAACTGGTG
CGCATCCCCGAGGCGAGGAACGTGCTCGACCGCTTCCCGCACCAGCTCTCGGGCGGCATGCGCCAGCGCGTGATGATCGC
CATGGCGCTGTCGTGCAAGCCCCAGCTCCTGATCGCCGACGAGCCCACCACGGCGCTGGACGTGACCATCCAGGCGCAGA
TCCTGCAGCTCATCCGCCAGCTGCAGGACGAGATGCACATGGGCGTGATCTTCATTACCCACGACATGGGCGTGGTGGCC
GAGGTGGCCGACCGCGTGCTCGTCATGTACCGCGGCGACAAGGTGGAGGAGGGCGCGTCCGAACAGCTGTTCGCCGCGCC
CCGGCACGCCTACACGCGCGCGCTGCTGTCGGCCGTGCCCAAGCTCGGTGCGATGCAGGGCACCGACCTGCCGCGCCCGT
TCGACCTGCTGCGCGTCGATGGCACCACCACGGTGGGCGAATCCACGTCCGTCGACACCCGCCCGGCCGACGCCCAGCCC
ATCCTGCGCGTGAAGAACCTCATCACGCGCTTCGACCTGCGCTCGGGCCTGCTCAACAGGGTCACGCGCCGCGTGCACGC
GGTGGAGCAGGTGAGCTTCGACCTCTACCCCGGCGAGACGTTGGCGCTGGTGGGTGAATCGGGCTGCGGCAAGTCCACCA
CCGGGCGCTCGCTGCTGCGCCTGGTGGAGAGCCAGAGCGGCGCCATCGAGTTCGGCGGGCGCAACATCCTCGAGCTGCCG
CGCGGCGAGGTGCAGGCGCTGCGCCGCGACATCCAGTTCATCTTCCAGGACCCGTTCGCCTCGCTGGACCCGCGCCTGAC
GGTGGGCTTCTCGATCATGGAGCCGCTGCTGGTGCACAAGATCGGCACGCGCGAGGAGGCCCAGGCCCGCGTGGACTGGC
TGCTGGAGAAGGTGGGCCTGCCGCGCGAGCACGCGCAGCGCTACCCGCACGAGTTCTCGGGCGGCCAGCGCCAGCGCATC
GCGATCGCCCGCGCCCTGGCGCTGAACCCCAAGGTCGTGGTCGCCGACGAATCCGTGTCGGCGCTGGACGTGTCCATCCA
GGCGCAGATCGTGAACCTGATGCTCGACCTGCAGCGCGAGCTGGGCGTGGCCTTTCTGTTCATCTCGCACGACATGGCCG
TGGTCGAGCGCATCAGCCACCGCGTGGCGGTGATGTACCTGGGCCGCATCGTCGAGATCGGCCCGCGCCGCGCGATTTTC
GAGAACCCCCAGCACCCCTATACCCGCAAGCTGATGGCCGCCGTGCCCATTGCCGACCCGGCGCGCCGCCACCTCAAGCG
CGCGCTGCTCGAAGGCGAGATCCCCAGCCCCATCCGCCCCGTGGGCGACGAGCCCGTGGTGCCGCCGCTGCAGGAGGTGG
GGCCGGGGCATTTCGTCGCGCCGCAGACGGCTTGA

Protein sequence :
MTTHSPHAAVPLQLPEQRVLAASALSVRFATSERTVDAVRDLSFHVDRGETLAIVGESGSGKSVTSLALMRLVEHGGGRI
IGGSALLRRRGGQVLDVARATQAQMRDVRGADVAMIFQEPMTSLNPVFTAGEQIAESIRVHQGMDRAGARAEALRMLELV
RIPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLLIADEPTTALDVTIQAQILQLIRQLQDEMHMGVIFITHDMGVVA
EVADRVLVMYRGDKVEEGASEQLFAAPRHAYTRALLSAVPKLGAMQGTDLPRPFDLLRVDGTTTVGESTSVDTRPADAQP
ILRVKNLITRFDLRSGLLNRVTRRVHAVEQVSFDLYPGETLALVGESGCGKSTTGRSLLRLVESQSGAIEFGGRNILELP
RGEVQALRRDIQFIFQDPFASLDPRLTVGFSIMEPLLVHKIGTREEAQARVDWLLEKVGLPREHAQRYPHEFSGGQRQRI
AIARALALNPKVVVADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGRIVEIGPRRAIF
ENPQHPYTRKLMAAVPIADPARRHLKRALLEGEIPSPIRPVGDEPVVPPLQEVGPGHFVAPQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-91 42