Gene Information

Name : Alide_4223 (Alide_4223)
Accession : YP_004128812.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 4417163 - 4418239 bp
Length : 1077 bp
Strand : -
Note : TIGRFAM: alanine racemase; KEGG: tmz:Tmz1t_3995 alanine racemase; PFAM: alanine racemase domain protein

DNA sequence :
ATGAGCCGCCCGGCCCGGGCGGATTTCGACCTGGCCGCGCTGCGCGCCAACTACGCCCACGCCAAGGCCGTGCACGGCGG
CAAGGTGGCGGCCACGCTCAAGGCCAACGCCTATGGCCACGGGGCCGTGGAATGCGCCAGGGCCCTGGCCGGCCAGGCCG
ACGCCTTCGCCGTGGCCTTCGCGCAAGAGGCCATGGAGCTGCGCGAGGCCGGGCTGACCGAGCCCATCCTGGTACTCGAA
GGTGCCTTCGGCATGGACGACGTGGCGCTGGCGCAGCGGCACGGGCTGTGGCTGGTGGTGCACCAGGAGGAGCAGTTGCG
CATGCTCGAATCGCTGCAAGACCGTGGTGGTGGCGCCGGCGTCCATGCCTGGCTCAAGATCGACACGGGCATGCACCGCG
CCGGCGTGGCGCCCGGGCAGGCCCGGGCCCTGTGGCAGCGGCTGGCCGCCTGCGACAAGGTGGCCGGCATCACGCTGATG
ACGCACCTGGCCTCGGCCGACGAGCCCGGCAACCCGATGACCGGGCGCCAGCTGGCCGTGTTCGCCGATGCCACGCAGGG
CCTGCCCGGGCCGCGCAGCATCGCCAACTCGGCCGGCGTCCTGGGCTGGAAGGGTGCGCACCAGGACTGGGCGAGGCCCG
GCATCATGCTCTACGGTGCCGACCCGCGCGGCATGCCCTCCGACGTGCTGCAGCCCGTGATGCGCCTCGCCAGCGAGGTG
TTCGTGGAGCGCTGGCTCGCGCCGGGCGAGGCCCTGGGCTACGGCGGCAGCTTCGTCGCCGACCGGCCCACGCGCGTGGG
GCTGGTGGCCATGGGCTATGCCGACGGCTACCCGCGCGTCGTGCCCTCGGGCACGCCGGTGGCGGTCGATGGCCGCCTGA
CCCGCATCATCGGGCGCGTGGCCATGGACATGCTCACTGTCGATCTGACCGACCTGCCCGGGGCAGGGCCGGGGGCGCAG
GTCGAGCTGTGGGGAAGCCAGGTGAGCGTGAACCAGGTGGCTGCTGCTGCCGGGACCATTGCCTATGAGCTGCTGTGCAA
TGTCAAGCGGGTGCGGCGGGTTTACCTCCGCTCGTAG

Protein sequence :
MSRPARADFDLAALRANYAHAKAVHGGKVAATLKANAYGHGAVECARALAGQADAFAVAFAQEAMELREAGLTEPILVLE
GAFGMDDVALAQRHGLWLVVHQEEQLRMLESLQDRGGGAGVHAWLKIDTGMHRAGVAPGQARALWQRLAACDKVAGITLM
THLASADEPGNPMTGRQLAVFADATQGLPGPRSIANSAGVLGWKGAHQDWARPGIMLYGADPRGMPSDVLQPVMRLASEV
FVERWLAPGEALGYGGSFVADRPTRVGLVAMGYADGYPRVVPSGTPVAVDGRLTRIIGRVAMDMLTVDLTDLPGAGPGAQ
VELWGSQVSVNQVAAAAGTIAYELLCNVKRVRRVYLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 4e-49 45