Gene Information

Name : Alide_4113 (Alide_4113)
Accession : YP_004128704.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4302876 - 4304402 bp
Length : 1527 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: bmj:BMULJ_03133 NAD-dependent aldehyde dehydrogenase

DNA sequence : 
ATGGACATGTTCGAGCTCAAGTATTTCAACCTCGAGGCCCGCTACCCCTACAAGCAAAAGTACGACAACTTCATCGGCGG
CAAATGGGTGGCCCCGCTGGCCGGACGCTATTTCGACAATGTCTCCCCCATCACCGGCAAGCCGTTCTGCACGGTGGCGC
GGTCGGACGCCGACGACGTGAACCTGGCCCTGGACGCCGCCCACGCCGCGCAGGCCGCATGGGCCAGGACCTCGGTGACC
GAGCGCTCCAACATCCTGCTCAAGATCGCCGACCGCATGGAGCAGAACCTGGAGCTGCTGGCGATCGCCGAGACCATCGA
CAACGGCAAGCCCCTGCGCGAGACCATGGCCGCCGACATTCCGCTGGCCATCGACCACTTCCGCTACTTCGCGGGCTGCA
TCCGCGCGCAGGAGGGCGGCATCTCCGAGATCGACGCCAACACCGTCGCCTACCACTTCCACGAGCCCATCGGCGTGGTC
GGCCAGATCATCCCGTGGAACTTCCCCATCCTCATGGCCTCGTGGAAGCTGCCCCCGGCGCTGGCCGCGGGCTGCTGCGT
GGTGATGAAGCCCGCCGAGCAGACCCCCGCTTCCATCATGGTGCTGATGGAGCTGATCGCCGACCTGCTGCCCCCGGGCG
TGGTGAACATCGTCAACGGCTTCGGCAAGGAGGCCGGCGAGGCGCTGGCCACGAGCAGGCGCATCTCGAAGATCGCCTTC
ACCGGCTCCACCGCCGTGGGCCAGCGCATCCTGCACGCCGCGGCCGACAACCTGGTCCCCTCCACCGTGGAGCTCGGCGG
CAAGAGCCCCAACATCTTCTTCGCCGACGTGCTGGACGCCGACGACGAGTTCCTGGACAAGGCGCTCGAAGGCTTCTCCA
TGTTCGCGCTGAACCAGGGCGAGGTCTGCACCTGCCCCTCGCGCATCCTGGTGCAGGAGTCGATCTACGAGCGCTTCATG
GAGCGCGCCGTGGCGCGCGTCGAGGCCATGAAGCAGGGCCATCCGCTGGACAAGAGCACCATGGTGGGGGCGCAGGTGTC
GCAGCAGCAGCTCGAACGCATCCTGGGCTACATCGACATCGGCCGCCAGGAAGGCGCCCGGTGCCTGACCGGCGGCGAGC
GCCTGCGCGCGGGCGGCGAGATCAACGACGGCTTCTTCATCAAGCCCACTCTGCTGTACGGCCAGAACGGCATGCGCGTG
TTCCAGGAGGAAATCTTCGGCCCCGTGGCCTCGGTGACGATCTTCAAGGACGCGGCGGACGCCGTGCGCATCGCCAACGA
CACCGACTACGGCCTGGGCGCCGGCGTGTGGACGCGCAACGGCATGCAGGCCTACCACATGGGCCGCGCCATCCAGGCGG
GCCGCGTGTGGACCAACTGCTACCACCTGTACCCCGCGCACGCCGCCTTCGGCGGCTACAAGAAGTCGGGCATCGGCCGC
GAGAACCACAAGCAGGCCCTGTCCAACTACCAGCAGACCAAGAACCTGCTCGTCAGCTACAGCCCGAAGGCGCTCGGCTT
CTTCTGA

Protein sequence : 
MDMFELKYFNLEARYPYKQKYDNFIGGKWVAPLAGRYFDNVSPITGKPFCTVARSDADDVNLALDAAHAAQAAWARTSVT
ERSNILLKIADRMEQNLELLAIAETIDNGKPLRETMAADIPLAIDHFRYFAGCIRAQEGGISEIDANTVAYHFHEPIGVV
GQIIPWNFPILMASWKLPPALAAGCCVVMKPAEQTPASIMVLMELIADLLPPGVVNIVNGFGKEAGEALATSRRISKIAF
TGSTAVGQRILHAAADNLVPSTVELGGKSPNIFFADVLDADDEFLDKALEGFSMFALNQGEVCTCPSRILVQESIYERFM
ERAVARVEAMKQGHPLDKSTMVGAQVSQQQLERILGYIDIGRQEGARCLTGGERLRAGGEINDGFFIKPTLLYGQNGMRV
FQEEIFGPVASVTIFKDAADAVRIANDTDYGLGAGVWTRNGMQAYHMGRAIQAGRVWTNCYHLYPAHAAFGGYKKSGIGR
ENHKQALSNYQQTKNLLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-147 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-153 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-153 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-153 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-152 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Alide_4113 YP_004128704.1 aldehyde dehydrogenase VFG0082 Protein 1e-147 64