Gene Information

Name : Alide_4034 (Alide_4034)
Accession : YP_004128627.1
Strain : Alicycliphilus denitrificans BC
Genome accession: NC_014910
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4205253 - 4206776 bp
Length : 1524 bp
Strand : +
Note : KEGG: ajs:Ajs_1391 hypothetical protein

DNA sequence :
ATGACGCTTTTTACGACCGACTACCTGGAGTACTACCTGACGCTGGTGTCCTGGATCGTCAACAACGGCATCTGGGCGGT
GCTGGTGTCGAGCGGAGTATTCGCGCTGCCGTTCGTCGCCATCATCGTGCAGGAGTGGTTGAAGGCCCGTGCGGAAGGTG
CCGACGAAGGCAACAAGGGCGTGCTCTCGGCTGCGCGCATCGAGAACCGGGTCTTCGTCGCCATCGTGGTGGTGATGTTC
GCTGGCATCCCGTTCATCGACGTGGACCTCAACACCATCCAGTACGACAGCTCGCGCTCGGCCCAGTGCCAGGTCAGCGT
GCCGCAGCCCACGGATACCGGCTGGTCGCAGTCCTTCAGCACCATCAACAACCAGTCGGCGAAGGTGCCGGTCTGGTGGG
CTTTCATGCACGCGCTCTCGCGCGCCGTCACGAGCGCCTCGGTGGCGGCGATCCCATGCGGCACGGACCTGCGGCAGATG
CGCATGGAGATCGACGCGACCCGCATTGACGACCCGGTACTGGCTCAGGAAGTAGCGGATTTCTCGCGGGATTGCTATGG
GCCTGCGCGGGCCAAATTGTTCATGCAGCGCCCTCAGCTTGATGAGCAGCAGATGCACGACGTGACCTGGATAGGGTCGA
GGTTTTTCACGGACACGGGCGGCTACTACGACACCTACCGCTCAAGCACGCCGCGCGACGACTGGCCCTACGACAGCACC
CGCGATGCGGGGCTTGCACAGGTGGGCAGCGGTGGCGGCTACCCGACCTGCAGGCAGTGGTGGGCCGATGGCGGCAATGG
CCTGCGGGCACGCCTGCTGGGACAGGTGGACCCGAACCTGTTGAATCGCCTGGCAGGCTGGGCCGGGTTCCTGAGCAGGG
CCGAGGTGGACGACTCGGTGATCCGCGCCATCGCGTCACCGCGGCAACAGAAATTGAACCAGGGTAGCGTCTATACGGAC
TATGGCGGCCAGATCGACAAGACCTTGCCGAACATCGTGACGCGGGCCACGGGAGACGTTGGGATGGCCGTCGGCGCGAT
TGCCGCGTTTCCCGCCATGGACGTCGTGAGACAGTCTCTGCCCATGGTCCTCGCCTTGCTCAAGATGGCGCTGGTCATCT
GCATCCCGCTTGTGCTGGTCGTAGGCACCTACGATCTGAAGACGGTCGTTACCGTCAGCGTCGTGCAGTTCGCGCTCTTC
TTCACGGACTTCTGGTTTCAGCTTGCGCGCTGGATCGATTCGACGATCCTGGATGCGCTCTATGGCTGGGGGTTCGGCTG
GAATCGGCCGCACACCAACTTCGACCCGCTGGTGGGGCTGAACAACGCCTTCGGAGACATGCTCCTGATGTTTGTCACGG
GCACGATGTTCATCGTACTGCCTACGTTCTGGATCATGGCCTTGGCTTGGGCGGGCGTTCGTGCCGGCAACGTGTTGCAA
GGCCTCGCAGGAGCCACCGGAGATGCCAAGGCTGCTGGCGGAAGGGGAGGAAGCATTGCGATCAATGCAGTGTCGAAGAA
GTGA

Protein sequence :
MTLFTTDYLEYYLTLVSWIVNNGIWAVLVSSGVFALPFVAIIVQEWLKARAEGADEGNKGVLSAARIENRVFVAIVVVMF
AGIPFIDVDLNTIQYDSSRSAQCQVSVPQPTDTGWSQSFSTINNQSAKVPVWWAFMHALSRAVTSASVAAIPCGTDLRQM
RMEIDATRIDDPVLAQEVADFSRDCYGPARAKLFMQRPQLDEQQMHDVTWIGSRFFTDTGGYYDTYRSSTPRDDWPYDST
RDAGLAQVGSGGGYPTCRQWWADGGNGLRARLLGQVDPNLLNRLAGWAGFLSRAEVDDSVIRAIASPRQQKLNQGSVYTD
YGGQIDKTLPNIVTRATGDVGMAVGAIAAFPAMDVVRQSLPMVLALLKMALVICIPLVLVVGTYDLKTVVTVSVVQFALF
FTDFWFQLARWIDSTILDALYGWGFGWNRPHTNFDPLVGLNNAFGDMLLMFVTGTMFIVLPTFWIMALAWAGVRAGNVLQ
GLAGATGDAKAAGGRGGSIAINAVSKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 91
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 79
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 1e-155 62
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-146 60
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 2e-146 60
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-146 59
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 6e-97 44
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 6e-97 44
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 6e-90 44
YE3465 YP_001007626.1 hypothetical protein Not tested YAPI Protein 2e-98 41